Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3884 ATGTCCTCGCCGGAGAATCTCCCTCTAGAAACCGCTCAAAAAATCATCCTCCGATGGGACTCCACCGCCTCCGAAGAAGCTCGTGAAAAAATGATCTTCGATCACTCAACAAACCGCGACGAAATCGATCTTTACCTCCAAGCCGTCGATGAAATCCAACGCTCCATATCCTCCGCCTCTCTCTCCGATAACCACCACTCCAAACCCTCCTCCACCATCCAGATCGCCATGGCTCGCTTGGAAGACGAGTTTCGTAACATCCTTATCTCTCATACCAACTCAATCGACCCTCCCTTAGATGAAGACTCTTCGTTCTCTTCTTCCACGACAAAACGACATCAGGACTTCAAAAACGACGACGATGAAGAAAACGAAGATGATGACCAAAACGACGATAAGCTTCTGCGTTTTGATAGTACTTGCTCTGTTGCTACTACTGCGACTTCTTCAAGCTACCGTTCGACTAGCAGCATCCGTGAGATCGATCTGATACCTTCCGAAGCGGTTTCCGATCTCCGATGTATCGCCGATAGAATGATTTCCTCCGGTTATCTCCGTGAATGCATTCAGGTTTACGGAAGTGTGAGAAAATCGGCTGTGGATTTGAATTTCAAGAAACTCGGTGTTGAGAAACTAAGCATAGGTGATGTTCAGAGATTGGATTGGGAGCAGCTGGAAACGAAGATTCGGAGATGGATTAGAGCTGCAAAGGTTTGTGTTCGAACGCTTTTCGCTAGTGAAAAGAGACTCTGTGAACAAATTTTTGAAGGAATTGGTACTTCCATTGATGATGCTTGTTTTATGGAAACTGTTAAAGGTCCTGCAATTCAGCTTTTCAATTTTGCTGAAGCGATTAGTATTAGTCGTAGGTCGCCTGAGAAATTGTTTAAGATTCTTGACCTTCATGATGCTTTGATGGATTTGATACCTGATATTGATGTTGTTTTTGATTCGAAGTCGTCTGAATCGATTCGGGTTCAGGCGGCGGAGATTTTGTCGCGGTTAGCGGAAGCTGCTAGAGGGATTTTATCTGAATTTGAAAATGCTGTTTTGAAGGAGCCTTCTAAGGTTCCGGTTCCAGGTGGAACGATTCATCCTTTGACTAGGTATGTGATGAATTACATAAGCTTGATCTCTGATTATAAGCAGACTTTGTATGAGCTTATAGTTTCGAAGCCTTCCACGGGTCCTAGATATGATCCTTTGAATCCTGATATGGATTTCGATGAACTCGAAGGGAAACCGCCTTTGGCTATTCATTTGATTTGGATTATTGTTATATTGCAATTCAATTTAGATGGGAAGTCAAAGCATTATAAAGATGCTTCTTTGAGTCATTTGTTTATTATGAACAATGTTCACTATATTGTTCAGAAGGTTAGAGGGTCGCCGGAATTGAGGGAAATGATCGGCGACGATTATTTGAAGAAGTTGACTGGGAAGTTTCGACAGGCTGCTACTAGCTATCAGAGAGCAACGTGGGTTAGGGTTTTGTATTGTTTGAGGGATGAAGGGTTGCACGGGAGTGGTGGATTTTCTTCTGGGGTGTCGAGAAGTGCTTTGAGGGAAAGGTTTAAGGCTTTCAATGCTATGTTTGAGGAGGTACATAGGACTCAAGCTGTTTGGTTGATACCGGATTCACAACTTAGGGAGGAGCTTCGGATATCTATATCAGAGAAACTACTTCCTGCGTATAGATCGTTCCTTGGTCGGTTCAGGAGTCATATAGAGAGCGGAAGACATCCGGAGAATTACATTAAGTATTCTGTCGAGGATCTGGAGGATGCTGTTTTGGATTTTTTCGAAGGGATTCCTGTTTCGCAGCACACGAGAAGGAGATCTCAGTGA 1848 0.4367 MSSPENLPLETAQKIILRWDSTASEEAREKMIFDHSTNRDEIDLYLQAVDEIQRSISSASLSDNHHSKPSSTIQIAMARLEDEFRNILISHTNSIDPPLDEDSSFSSSTTKRHQDFKNDDDEENEDDDQNDDKLLRFDSTCSVATTATSSSYRSTSSIREIDLIPSEAVSDLRCIADRMISSGYLRECIQVYGSVRKSAVDLNFKKLGVEKLSIGDVQRLDWEQLETKIRRWIRAAKVCVRTLFASEKRLCEQIFEGIGTSIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDVVFDSKSSESIRVQAAEILSRLAEAARGILSEFENAVLKEPSKVPVPGGTIHPLTRYVMNYISLISDYKQTLYELIVSKPSTGPRYDPLNPDMDFDELEGKPPLAIHLIWIIVILQFNLDGKSKHYKDASLSHLFIMNNVHYIVQKVRGSPELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHGSGGFSSGVSRSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLLPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSQHTRRRSQ* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3884 615 Pfam Exo70 exocyst complex subunit 231 597 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa4g3884 615 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 615 - -
Psa4g3884 615 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 615 IPR004140 GO:0000145|GO:0006887
Psa4g3884 615 Gene3D Exocyst complex component Exo70 15 611 - -
Psa4g3884 615 SUPERFAMILY Cullin repeat-like 28 602 IPR016159 -
Psa4g3884 615 MobiDBLite consensus disorder prediction 96 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3884 Psa-Chr4 324983225 324986986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3884 9 615 EXO70 exocyst subunit family AT1G72470 69.268 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3884 K07195 - gmx:100808671 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3884 4 324983225 324986986 Psa4g3884 4 324983225 324986986 ECH