Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3883 ATGGCCATAGCTCCAACAATTTTCCATCCATCATTCTTCATCTTGATCTTCAATATCATCATCAGATTTTCCATCACAAGTTCCATGACAGAAGCAGAAGCATTGTTGAATCTAAAAAACTCTTTCACCAATTCTGATTCTCTTAATAATTGGATCGCCAGCACTTTGCCTTGCGCCGAAGACGGACAATGGGAAGGCGTAATATGTTACAACGGGTTAGTAAGCGGTCTTCGCCTCGGTGGAATGGGACTATTAGGAAAAATTGATGTTGATGCATTGCTTGAACTCAAAGGTCTAAGAACTATTAGTCTTAACGATAACTCTTTCGTAGGTTCGATACCGGAATTGAATCGAATCGGTTACTTAAAAGCGATATATTTGTCGAGAAACAAATTCTCAGGACATATTCCTAAGGAATATTTTCAGAGTATGAAATCATTGAAGAAAATTTATTTATCTGATAATGAATTCACAGGTGAACTTCCTTTATCATTGGCTGAGGTTCCTACACTTGTTGAATTACATCTTGAAAATAATCAGTTTAGTGGAATCATTCCAAATTTGAATAATCCTGTATTGCTGGCATTAAATGTTTCAAACAATAATCTGGAAGGTGAAGTTCCTGAAGGTTTGATGAGGTTCAATGAGAGTTCTTTTCTAGGGAATGCTGGTTTATGCGGCGAGAAATTCGGTAAAATATGTGGACAAACAATGATGAAGAAGGAGCCTGTTAGTCCACAAGAGATTAATAATATTACACAACTCAACAACCATAATAATAGTAATGTTTATGTGAGTGTGCCTGATCAAAGTAAGCATAGGTCATTGCAGATTATTGGCATTGTTATAACATGTGTAGCACTCATTGCACTTGCTATATTTTTGATTGTGAGATCAAGAAAAAAGAAAGAGAAGGAGAAATCGAACGATGACGGAGAGAAAAGTGGACTGGAAAGTGGGAACGATTGTGGTGGAAGTTTTGAAGTTCAAGTAAGTAGTAATAGTATTTCTAGTAATGATATTAGTAATAATCAAGTGAAAAGAGATAATTTGTCGAAAAAAACATCGTCTAGTAGAAGAAGTTCTTCACAAGGAAGTAGAGGGATAGGTGAGCTTGTGATGATGAATGAGGAGAAGGGTGTGTTTGGTATGCCTGATTTGATGAAAGCTTCTGCTGAAGTTCTTGGAAATGGAGGGTTTGGATCTTCTTATAAAGCTGTCATGTCTAATGGTGTTGCTGTGGTTGTGAAAAGGACTAGAGAGTTGAATGCTTTGGGAAAAGATGGTTTTGATGCTGAGATGAAGAATCTTGCAAGGTTACATCATTGGAATGTTTTGACACCTTTGGCTTATCATTATAGAAAAGATGAGAAGTTAGTTATCTCTGAGTATGTTCCTAGAGGAAGTCTACTCTATTTGTTGCATGGTGATAAAGGACCGTCTCATACCGAACTAAATTGGAACACACGTCTAAAAATAGTACGAGGAATTGCAAAAGGAATGCAATATATTCACACAAATCTCTCTTCATCTGATCTACCACATGGAAATCTCAAATCAAGCAACATTCTAATTGGACCAGATTATGAACCCTTACTTATGGACTACGGTTTCATCCATCTTGTGAACCCTTCAAATTTCGCAAACACGTTATTTGCTTATAAGTCACCAGAAGCCTTGCAACACAATCAAATTTCGCCTCGTTCTGACGTATACTGTCTCGGCATAGTCATACTCGAAATAATCACCGGAAAATTTCCTGCGCAGTATCTCAACAACGGTAAAGGCGGGACCGATCTAGTACAATGGGTGACATCGTCAGTTTCTGAAGGAAAAGAGCTTGAATTACTTGATCCTGAAATTGCGAAAAAAAGAGATTCATTAGAGGATATGAAACAACTTGTTTACATTGGTGCAGCGTGTACCGAAAGTAATCCTCGAAAGAGAATAGATATAATGGAAGCTGGTAGAAGAATAGAAGAGATTAAAACAAATGAAGTTGAACTTGTTAAAGAATCAAGAACAATAGAGGTTTTTCCTTCTTTTGGAGAGGATGGTTATGGAGATTCTTCTCAAGGGTATGATGATGAAAAAGTATCAAGGAGGAAACGTGGAACAAATAGTTTTGGAAGTAAAGATACTTTGGATTTTGGTGTTTCCTAA 2163 0.3689 MAIAPTIFHPSFFILIFNIIIRFSITSSMTEAEALLNLKNSFTNSDSLNNWIASTLPCAEDGQWEGVICYNGLVSGLRLGGMGLLGKIDVDALLELKGLRTISLNDNSFVGSIPELNRIGYLKAIYLSRNKFSGHIPKEYFQSMKSLKKIYLSDNEFTGELPLSLAEVPTLVELHLENNQFSGIIPNLNNPVLLALNVSNNNLEGEVPEGLMRFNESSFLGNAGLCGEKFGKICGQTMMKKEPVSPQEINNITQLNNHNNSNVYVSVPDQSKHRSLQIIGIVITCVALIALAIFLIVRSRKKKEKEKSNDDGEKSGLESGNDCGGSFEVQVSSNSISSNDISNNQVKRDNLSKKTSSSRRSSSQGSRGIGELVMMNEEKGVFGMPDLMKASAEVLGNGGFGSSYKAVMSNGVAVVVKRTRELNALGKDGFDAEMKNLARLHHWNVLTPLAYHYRKDEKLVISEYVPRGSLLYLLHGDKGPSHTELNWNTRLKIVRGIAKGMQYIHTNLSSSDLPHGNLKSSNILIGPDYEPLLMDYGFIHLVNPSNFANTLFAYKSPEALQHNQISPRSDVYCLGIVILEIITGKFPAQYLNNGKGGTDLVQWVTSSVSEGKELELLDPEIAKKRDSLEDMKQLVYIGAACTESNPRKRIDIMEAGRRIEEIKTNEVELVKESRTIEVFPSFGEDGYGDSSQGYDDEKVSRRKRGTNSFGSKDTLDFGVS* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3883 720 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Psa4g3883 720 SUPERFAMILY Protein kinase-like (PK-like) 393 657 IPR011009 -
Psa4g3883 720 SUPERFAMILY L domain-like 29 214 - -
Psa4g3883 720 MobiDBLite consensus disorder prediction 691 706 - -
Psa4g3883 720 Gene3D Transferase(Phosphotransferase) domain 1 465 679 - -
Psa4g3883 720 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 668 - -
Psa4g3883 720 Gene3D Ribonuclease Inhibitor 30 141 IPR032675 -
Psa4g3883 720 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 5 668 - -
Psa4g3883 720 Gene3D Phosphorylase Kinase; domain 1 388 464 - -
Psa4g3883 720 ProSiteProfiles Protein kinase domain profile. 389 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3883 720 Gene3D Ribonuclease Inhibitor 142 376 IPR032675 -
Psa4g3883 720 MobiDBLite consensus disorder prediction 338 369 - -
Psa4g3883 720 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Psa4g3883 720 Pfam Protein kinase domain 393 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3883 720 MobiDBLite consensus disorder prediction 681 706 - -
Psa4g3883 720 MobiDBLite consensus disorder prediction 338 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3883 Psa-Chr4 324888586 324891348 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3883 19 662 Receptor kinase-like Gene Family AT3G42880 44.817 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa4g3883 Pkinase 6.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3883 - - mtr:MTR_8g021350 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3883 4 324888586 324891348 Psa4g3883 4 324888586 324891348 ECH