Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3875 ATGGAATGTATATTTATTATCTACAGGTTGCTCAAAGTTCTGGCTACGGATGAAGATGTGTATCTTGTTTTTGAGAATGTTCACCTAAATTTTAAAAGATTCATCACCAATCCCATGCTTAGCCTTGAAACATTTGAAAGATCTGTTCTACGTCAAGCTCTTTCTGGACTCGCATATTCTCACAACATTGTACACACAGATATCAAACCTTATAATCTTCTTTTTGAATACCACCACGGTGAAGCTCCTACAGTGAAGCTATGCAATATTCGTGAACCCAAAACTTGTATTAATAAAGGCATTCCTTGTTATAAAGCATCGGAAGTTTTGATGGGCTCAACCAATTACTCAACTACAGTTGAGATCTGGTCTATGGGCTGCATATTTGCTCACATCATTAAGCGCCAACCTCTGTTCGTCGGTAGAGACGAACCAAAGATATTGGCTGAGATATTTTGTTTGTTTGGTACGCCAACAGAACAAACTTGGCCCGACTTGTCTTCTATATGCGATTTTATTGAAGCATTTAACCCTCTAATACAGCCTAAGGACCTAGCTGAAGAGTTCCCTAGCCTTCATCCTGCTGGTCTTGATCTTCTTTCGGATTTCAGCTTATGA 618 0.3916 MECIFIIYRLLKVLATDEDVYLVFENVHLNFKRFITNPMLSLETFERSVLRQALSGLAYSHNIVHTDIKPYNLLFEYHHGEAPTVKLCNIREPKTCINKGIPCYKASEVLMGSTNYSTTVEIWSMGCIFAHIIKRQPLFVGRDEPKILAEIFCLFGTPTEQTWPDLSSICDFIEAFNPLIQPKDLAEEFPSLHPAGLDLLSDFSL* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3875 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 63 75 IPR008271 GO:0004672|GO:0006468
Psa4g3875 205 PANTHER CYCLIN-DEPENDENT KINASE A-2 13 201 - -
Psa4g3875 205 Pfam Protein kinase domain 7 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3875 205 PANTHER CELL DIVISION PROTEIN KINASE 13 201 - -
Psa4g3875 205 Gene3D Phosphorylase Kinase; domain 1 15 26 - -
Psa4g3875 205 SMART serkin_6 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3875 205 Gene3D Transferase(Phosphotransferase) domain 1 27 201 - -
Psa4g3875 205 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3875 205 SUPERFAMILY Protein kinase-like (PK-like) 7 201 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3875 Psa-Chr4 323801704 323802983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3875 7 205 Core Cell Cycle Gene Families AT3G48750 38.318 7.79e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Psa4g3875 Pkinase 3e-20 CL0016