Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3863 ATGGACGACGAGGACGAGATCCACTCCAATCCATCACCGTTGAGCGGATCTCCGGTGTCATCACCGGGAGCAATAGGTCGGATTTCGGTGACGGTTGCGGCGCCTGCGCCACAAGAACAACCGGTGGTGAACAGCTATGCATTAGCGCTTCCGATTCAGAATCAGCCGAGAGGAAACAACGGTGGAGGGAGGGAGGATTGCTGGAGCGAAGGCGCGACGGCGGTGCTGATCGAAGCGTGGGGAGAGAGGTATCTTGAATTGAGCAGAGGGAATCTGAAGCAAAAGCATTGGAAGGAGGTGGCTGAGATCGTTAACGGGAGAGAGGATTATTTGAAGGCGCCGAAAACTGATATCCAGTGCAAAAACCGGATCGATACGGTTAAGAAGAAGTACAAATCGGAGAAAGCCAAGATCGCTGCCGGAGGCGGCATCCCAGTCAGTAAATGGCCGTTTTATGATCGATTAGAACACCTGATCGGTCCAACCGCTAAGATCACCGGCGTCACAGGTGCCAGCACTTCTGGAAACAGTAATTTGCCACCGCAAAAAGTTCCGCTGGGAATTCCGGTAAATCTTCGCCCCGGCGGTGTTGTAAATCTGTTTAATAATTCTCAAAAGAAAAATCAGAAGCAACAGCCACATCCACAGGTTCAGTTGAATTACCAGAAGGTTCAGCTCCGACCACGAGTTCCGGCGGTGGATTCCGATAACTCATCGGAAAGAGAAGCAATATCGCCAGTTTCAAGTGATAGTTTACCGCCGGAGAGTCACGAGAGGAAGAGGGCGAAAGTGAATCCAACTGGCGGAGAAGGGAGAAGAAAAGGAAAAGGTTGGGGAAGTGCGGTGAGGGAATTGACTCAGGCAATTGTGAAATTTGGTGAAGCTTATGAACAAGCGGAGACATCGAAGTTGCAGCAGGTAGTGGAGATGGAGAAACAGAGGATGAAGTTTTCAAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAAACACAGTTGGAGATTTCACAGCTCAAGCTTGGAAGAAGAAAACGTGTTACTGGTAATGGTAACCCTAGCAATCATCATAACAACAACACCAATGAAAACATCAACAACAACCATAACAATAATAGTGACACTGAATGA 1131 0.4854 MDDEDEIHSNPSPLSGSPVSSPGAIGRISVTVAAPAPQEQPVVNSYALALPIQNQPRGNNGGGREDCWSEGATAVLIEAWGERYLELSRGNLKQKHWKEVAEIVNGREDYLKAPKTDIQCKNRIDTVKKKYKSEKAKIAAGGGIPVSKWPFYDRLEHLIGPTAKITGVTGASTSGNSNLPPQKVPLGIPVNLRPGGVVNLFNNSQKKNQKQQPHPQVQLNYQKVQLRPRVPAVDSDNSSEREAISPVSSDSLPPESHERKRAKVNPTGGEGRRKGKGWGSAVRELTQAIVKFGEAYEQAETSKLQQVVEMEKQRMKFSKDLELQRMQFFMKTQLEISQLKLGRRKRVTGNGNPSNHHNNNTNENINNNHNNNSDTE* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3863 376 MobiDBLite consensus disorder prediction 205 279 - -
Psa4g3863 376 MobiDBLite consensus disorder prediction 343 376 - -
Psa4g3863 376 MobiDBLite consensus disorder prediction 253 270 - -
Psa4g3863 376 Pfam Myb/SANT-like DNA-binding domain 65 158 IPR044822 -
Psa4g3863 376 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 2 340 - -
Psa4g3863 376 MobiDBLite consensus disorder prediction 238 252 - -
Psa4g3863 376 MobiDBLite consensus disorder prediction 348 376 - -
Psa4g3863 376 MobiDBLite consensus disorder prediction 205 223 - -
Psa4g3863 376 Gene3D - 68 133 - -
Psa4g3863 376 MobiDBLite consensus disorder prediction 1 22 - -
Psa4g3863 376 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 2 340 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3863 Psa-Chr4 322808678 322811237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3863 26 360 Trihelix Transcription Factor Family AT3G14180 48.668 1.39e-97 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Psa4g3863 Myb_DNA-bind_4 6e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3863 - - cam:101508093 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3863 4 322808678 322811237 Psa4g3863 4 322808678 322811237 ECH