Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3843 ATGGAAGGCGAAGCTCCATCAATGGAGAATCCCAAAATCTCAGCGTATTATCAGACTAGGTTAGCACACTTCGGCGTCGTCAGCACCGAGTGGCTAGCTCAGGCTCAGTCCGCAACAAAACCTATCCCATCATCATCAACCGACGCATACACTGATAAAGATGCCAATTTCTCTGTAATCGATGAATTCAATCGGTGGCGGAATCATCCCGATTTGGCCGAGGCTGTCGCCGCAATTCGTGCCCTCGCTGCCGTTATCAGCTCTAGTAAAGCTTCCACTATGATGCAACTCGAAATCGAACTCAAAAACGCCTCTGATACCCTCAAAGCATGGGATACAACCTCTATCTCATTGACAGCGGCGTCTGATTTGTTTATGAGATACGTTACAAGGACATCTGCTTTGGAATTTGAAGACTTCAATTCTGCTAAAGCTCGCTTGATTGAGCGGGCTGACAAGTTTGGGGAAATCTCCTACAAGGCTCGCAAGGTTATTGGAATGCTTAGTCAAGATTTTATCTTTGATGGTTGTACTATTTTGGTTCATGGTTTTTCTAGGGTTGTCTTTGAAGTTCTTAAACTGGCTGCGCATAATAAGAAACGCTTTCGGGTCTTCTGCACAGAGGGGAGACCAGATCGAACAGGTTTAAGGCTGTCCAATGAGCTGGCCAAGCTTGATGTTCCTGTGAAACTTGTGATAGACTCTGCAGTGGCTTATACCATGGATGATGTGGACATGGTATTTGTCGGGGCAGATGGAGTTGTTGAAAGTGGTGGTATAATTAATATGATGGGAACATATCAAATTGCGTTGGTTGCAAAGAGTATGAATAAACCAGTTTATGTGGCTGCTGAAAGCTACAAGTTTGCTCGTCATTACCCTCTCGACCAAAAGGATTTGGCACCCGCCCTACGACCAGTTGATTTTGGTGTACCTATTCCATCCAAGGTTGAGGTCGAATGCTCTGCCCGGGATTATACTCCTCCTCAGTATTTGACTTTGCTTTTCACAGATTTAGGCGTTCTTACTCCATCAGTTGTTAGCGATGAACTCATCCAGCTATACTTATAA 1071 0.4491 MEGEAPSMENPKISAYYQTRLAHFGVVSTEWLAQAQSATKPIPSSSTDAYTDKDANFSVIDEFNRWRNHPDLAEAVAAIRALAAVISSSKASTMMQLEIELKNASDTLKAWDTTSISLTAASDLFMRYVTRTSALEFEDFNSAKARLIERADKFGEISYKARKVIGMLSQDFIFDGCTILVHGFSRVVFEVLKLAAHNKKRFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDDVDMVFVGADGVVESGGIINMMGTYQIALVAKSMNKPVYVAAESYKFARHYPLDQKDLAPALRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3843 356 SUPERFAMILY NagB/RpiA/CoA transferase-like 72 355 IPR037171 -
Psa4g3843 356 Gene3D - 159 356 IPR042529 -
Psa4g3843 356 Pfam Initiation factor 2 subunit family 70 344 IPR000649 GO:0044237
Psa4g3843 356 Gene3D - 54 157 IPR042528 -
Psa4g3843 356 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 13 356 - -
Psa4g3843 356 Coils Coil 94 114 - -
Psa4g3843 356 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 13 356 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3843 9 356 Eukaryotic Initiation Factors Gene Family AT1G53880 78.933 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3843 K03239 - gmx:102669842 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3843 4 321511198 321514676 Psa4g3843 4 321511198 321514676 ECH