Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3831 ATGAACAAAATAAAACAATTCCTAGCCAGAATCTCAAACTCCGGCAACAACAACAACAACAAAAAAAAACTCATCCTCACCCTTTTCACAACGGTTCTCATTATAACCGCCATTGTAGCCATTATCGCAACCGCAACCACAACCAAAAACTCAAACAAAACCAACAAAATCACTTCATCATCTCTCTCACTCTCTCACCATTCTCACACCATTATCAAATCAGCTTGCACCACCACACTCTACCCCGAACTTTGTTTCTCCGCCATCTCCTCTGAACCAAACATAACTCACAAAATCACCAACCACAAAGACGTTATCTCAGTCTCTCTCAACATCACAAAAAGAGCAGTCGAACACAACTTCTTCACCGTGGAAAATCTTCTCACGTTAAAAAACCTCACCGGGAGAGAGAAAATCGCTCTTCATGATTGCTTAGAAACCATTGATGAAACGCTAGATGAACTCAAAGAAGCTGAGGAAGATCTTGTGTTATATCCAGCTAAAAAGACAGTTTATCAACATGCTGACGATCTCAAAACGCTGATAAGCGCCGCCATTACTAACCAGGTAACTTGCTTGGACGGTTTCTCGCACGACGGTGCTGATAAGAGAGTGAGAAAGGTTCTAGAAGAAGGACAAGTCCACGTGGAGCATATGTGTAGTAATGCATTAGCCATGACGAAGAACATGACGGATTCAGACATAGCAGAATTTGAACAGAAAAACATGTTGAAAAGTGAAAGAAACGGTAGGAAATTATTGGAGGAGGAGAATGGAGTGAAGTGGCCGGAGTGGATATCGGCGGGGGATAGGAGGCTGCTGCAAGGGGGAGCAGTGAAGGCGGATGTGGTGGTCGCGGCGGATGGGAGTGGGAACTTTAAGACGGTGTCGGAGGCGGTGGCGGCTGCTCCTTTGAAGAGTAGTAAGAGATTTGTAATTAAGATAAAAAGTGGGGTGTATAAAGAAAACGTGGAGGTGCCAAAGAAGAAGATAAATATAATGTTTTTGGGAGATGAAAACGTGGAGGTGCCAAAGAAGAAGATAAATATAATGTTTTTGGGAGATGGTAAAACTAGCACTATTATTAGTGGTGATAGAAATGTTGTTGATGGAAGCACTACTTTTCACTCTGCTACTGTCGCCATAGTAGGAGCAAATTTTCTAGCAAGAGACATAACATTCCAAAACACAGCTGGTCCAGCAAAGCACCAAGCAGTGGCCCTAAGAGTTGGTGCAGACCTCTCAGCCTTCTACAACTGCGACGTCATAGCCTACCAAGACACACTCTATGTCCACAACAACAGACAATTCTTCGTCAACTGTTTCATTTCCGGAACCGTCGATTTCATCTTCGGCAACGCAGCGGTCGTCTTCCAAAACTGCGACATTCATGCAAGACGTCCAAACTCAGGACAGAAGAACATGGTCACTGCACAAGGAAGGGTTGATCCTAACCAAAACACTGGAATTGTGATACAGAAATGTAGGATAGGTGCAACTAAAGATTTGGAGGGTGTGAAGAGTAGTTTTCCTACTTATCTTGGAAGGCCTTGGAAGGAGTATTCTAGAACAGTGATTATGCAAAGTGTTATTAGTGATGTTATTGAACCTGTTGGATGGCATGAATGGAATGGAAATTTTGCTTTGGATACTTTGGTTTATAGGGAATATTTGAATACTGGTCCTGGTTCTGGGACTTCTAAGAGGGTGACATGGAAAGGGTTTAAGGTTATTAGTAATGTTGCTGAGGCACAAAGTTTTACTGCTGGGAATTTTATTGGTGGGTCTAGTTGGTTGGGCTCTACTGGGTTTCCTTTTTCTCTTGGGCTTTAA 1833 0.4294 MNKIKQFLARISNSGNNNNNKKKLILTLFTTVLIITAIVAIIATATTTKNSNKTNKITSSSLSLSHHSHTIIKSACTTTLYPELCFSAISSEPNITHKITNHKDVISVSLNITKRAVEHNFFTVENLLTLKNLTGREKIALHDCLETIDETLDELKEAEEDLVLYPAKKTVYQHADDLKTLISAAITNQVTCLDGFSHDGADKRVRKVLEEGQVHVEHMCSNALAMTKNMTDSDIAEFEQKNMLKSERNGRKLLEEENGVKWPEWISAGDRRLLQGGAVKADVVVAADGSGNFKTVSEAVAAAPLKSSKRFVIKIKSGVYKENVEVPKKKINIMFLGDENVEVPKKKINIMFLGDGKTSTIISGDRNVVDGSTTFHSATVAIVGANFLARDITFQNTAGPAKHQAVALRVGADLSAFYNCDVIAYQDTLYVHNNRQFFVNCFISGTVDFIFGNAAVVFQNCDIHARRPNSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATKDLEGVKSSFPTYLGRPWKEYSRTVIMQSVISDVIEPVGWHEWNGNFALDTLVYREYLNTGPGSGTSKRVTWKGFKVISNVAEAQSFTAGNFIGGSSWLGSTGFPFSLGL* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3831 610 CDD PMEI-like_3 74 231 - -
Psa4g3831 610 Pfam Plant invertase/pectin methylesterase inhibitor 71 226 IPR006501 GO:0004857
Psa4g3831 610 ProSitePatterns Pectinesterase signature 2. 443 452 IPR033131 -
Psa4g3831 610 PANTHER PECTINESTERASE 339 609 - -
Psa4g3831 610 PANTHER PECTINESTERASE 19 338 - -
Psa4g3831 610 Pfam Pectinesterase 338 595 IPR000070 GO:0030599|GO:0042545
Psa4g3831 610 TIGRFAM PME_inhib: pectinesterase inhibitor domain 60 230 IPR006501 GO:0004857
Psa4g3831 610 Gene3D - 276 610 IPR012334 -
Psa4g3831 610 PANTHER PECTINESTERASE 339 609 - -
Psa4g3831 610 PANTHER PECTINESTERASE 19 338 - -
Psa4g3831 610 SUPERFAMILY Pectin lyase-like 278 338 IPR011050 -
Psa4g3831 610 Gene3D Invertase/pectin methylesterase inhibitor family protein 66 231 IPR035513 -
Psa4g3831 610 SMART PMEI_2 67 226 IPR006501 GO:0004857
Psa4g3831 610 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 231 IPR035513 -
Psa4g3831 610 SUPERFAMILY Pectin lyase-like 339 609 IPR011050 -
Psa4g3831 610 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3831 Psa-Chr4 321110106 321114394 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3831 14 610 Carbohydrate Esterase AT3G14310 65.905 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3831 K01051 - gmx:100776623 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3831 4 321110106 321114394 Psa4g3831 4 321110106 321114394 ECH