Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3814 ATGTCGGCGGATCCATGGTTGATGCTGATGCTGGTTTTCATCACTACCTCTACTCTTGTTCTCATCAATGGTGACACAGATCCAAGTGATGGGTCTTCTTTAATTACTTTATATCAAAGTATGAACTCACCGCCCCAGATAAATTGGCCGGTCAATGGCAACAACATCGATCCTTGTGGACAATCATGGACAGGCATTACTTGCTCGGGAAACCGAATCACAGAAATTAAGTTACCTGGTCATGGACTAAGCGGAACTTTGGGTTACCAGCTACAAACCTTGTCAGCTCTGACAAACCTAGACATGAGTAACAACAATCTCGCTGGCACTTTACCGTACCAGTTTCCTCAAAATTTGCAGCACTTAAATCTTGCTAATAATAACTTCAACGGAGGGATACCTTATTCTTTTTCCGATCTTACTTCTCTTATAACCCTGAATCTCGGTCACAATCAATTCCAACAAGGACTGTCTTTGAACTTTCAAAAGCTTACTTCCCTTTCTACGTTAGATGTTTCTTTCAATACTTTGACTGGAGACCTTCCTCAGACGATGAGCTCACTTTCAAGCATAAACACCATGTATCTACAAAACAATCAATTTTCAGGAACCATTGATGTCCTTGCGAATCTACCTCTTGATAATCTGAATGTGGAAAACAATCATTTTACAGGATGGATACCAGAACAGTTGAAAAACATAAACCTACAAAAGAATGGTAATTCATGGAGCTCCGGACCTGCACCCCCACCTCCTCCCGGTACACCTCCAATACCAAAAGACAAAGGTAGTCATCATAAGTCTGGTGGACATAACAGCCCGTCGGGTTCTGACTCAAGTGACGGAAGCAAAAAATCAGGTATAGGAGGTGGTGCCATAGCTGGAATAGTGATCTCTATTGTAGTCGTTGGGGCAATAGTAGCATTCTTTCTGTTGAAGAAAAGATCGAAAAAGAAGTCGTACCCAGATGTGGAAAAGCTAGACAATCAGCCCTTGGCTCCTTCAAGTGAAGTTCATGGAATGAATTCAATGCAAACTTCTTCTGTGATTGACTTGAAGACATTTGATACTTCTGCGGCTTCAATAAGTCTTAAACCCCCTCCTAAATCATTTGATGAAGACGAGTTTCCAAAGAAACTCGCCGTAGTCAAGAAGACCGTAGCACCTCCTGCAAATTTGAAATCATATTCAATAGCTGACCTGCAGATTGCTACTGGAAGCTTCAGCGTGGATCATCTTCTTGGCGAGGGGTCTTTTGGACGTGTATACCGTGCTCAATTTGATGACGGAAAGGTTCTTGCCGTGAAGAAGATAGATTCATCAGTCCTTCCCAATAATTTGTCTGATGATTTCATGGAAATAGTTTCAAACCTCTCTCGTTTGCATCATCCCAATGTGACGGAGCTTGAAGGTTATTGTTGTGAGCATGGACAACACCTCTTAGTCTACGAGTTTCACAAAAACGGATCCCTGCACGACTTCCTTCACCTCCCTGATGATTACGTTAAACCATTGATATGGAATTCACGCGTCAAGATTGCTTTGGGGATCGCACGCGCTTTAGAGTACCTACACGAAGTTTGTTCACCGTCGGTTGTTCATAAGAATATAAAGGCAGCCAACATATTGCTTGATGCTGATCTTAATCCTCATCTTTCAGACAGTGGATTGGCCAGCTATATTCCGAACGCAAACCAGGTATTGAACAATAATGCTGGATCCGGAAACGATGCTCCAGAAGTCGGATTGTCTGGTCAGTATACTCTCAAGAGTGATGTCTACAGCTTCGGAGTCATCATGTTGGAGCTTCTAAGCGGACGTAAACCATTTGATAGCTCAAGGTCGAGGTTTGAACAGTCGTTGGTTCGATGGGCGACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCACTAGAAGGACTCTACCCTGTCAAGTCTCTTTCTCGATTCGCCGATGTCATTGCACTTTGTGTTCAGCCGGAACCTGAATTCCGACCACCTATGTCCGAAGTGGTTCAAGCATTGGTTCGGTTAGTGCAGCGAACGAACATGAGCAAACGGACATTTGGAACTGATCAAGGAGGACCCAACCATGATGATCAAGAAATCCTAGACATGTAA 2136 0.4326 MSADPWLMLMLVFITTSTLVLINGDTDPSDGSSLITLYQSMNSPPQINWPVNGNNIDPCGQSWTGITCSGNRITEIKLPGHGLSGTLGYQLQTLSALTNLDMSNNNLAGTLPYQFPQNLQHLNLANNNFNGGIPYSFSDLTSLITLNLGHNQFQQGLSLNFQKLTSLSTLDVSFNTLTGDLPQTMSSLSSINTMYLQNNQFSGTIDVLANLPLDNLNVENNHFTGWIPEQLKNINLQKNGNSWSSGPAPPPPPGTPPIPKDKGSHHKSGGHNSPSGSDSSDGSKKSGIGGGAIAGIVISIVVVGAIVAFFLLKKRSKKKSYPDVEKLDNQPLAPSSEVHGMNSMQTSSVIDLKTFDTSAASISLKPPPKSFDEDEFPKKLAVVKKTVAPPANLKSYSIADLQIATGSFSVDHLLGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNNLSDDFMEIVSNLSRLHHPNVTELEGYCCEHGQHLLVYEFHKNGSLHDFLHLPDDYVKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKNIKAANILLDADLNPHLSDSGLASYIPNANQVLNNNAGSGNDAPEVGLSGQYTLKSDVYSFGVIMLELLSGRKPFDSSRSRFEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTFGTDQGGPNHDDQEILDM* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3814 711 ProSiteProfiles Protein kinase domain profile. 408 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3814 711 MobiDBLite consensus disorder prediction 691 711 - -
Psa4g3814 711 PRINTS Leucine-rich repeat signature 97 110 - -
Psa4g3814 711 PRINTS Leucine-rich repeat signature 164 177 - -
Psa4g3814 711 SUPERFAMILY L domain-like 28 233 - -
Psa4g3814 711 SUPERFAMILY Protein kinase-like (PK-like) 390 680 IPR011009 -
Psa4g3814 711 MobiDBLite consensus disorder prediction 259 284 - -
Psa4g3814 711 Gene3D Ribonuclease Inhibitor 182 245 IPR032675 -
Psa4g3814 711 Gene3D Phosphorylase Kinase; domain 1 374 485 - -
Psa4g3814 711 PANTHER OS01G0253100 PROTEIN 16 707 IPR045271 GO:0004714|GO:0006468
Psa4g3814 711 Gene3D Transferase(Phosphotransferase) domain 1 487 699 - -
Psa4g3814 711 MobiDBLite consensus disorder prediction 269 284 - -
Psa4g3814 711 Pfam Leucine rich repeat N-terminal domain 28 69 IPR013210 -
Psa4g3814 711 Gene3D Ribonuclease Inhibitor 28 181 IPR032675 -
Psa4g3814 711 ProSitePatterns Protein kinases ATP-binding region signature. 414 437 IPR017441 GO:0005524
Psa4g3814 711 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 16 707 - -
Psa4g3814 711 Pfam Leucine rich repeat 96 153 IPR001611 GO:0005515
Psa4g3814 711 Pfam Protein tyrosine and serine/threonine kinase 410 680 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3814 Psa-Chr4 320358419 320363142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3814 7 697 Strubbelig Receptor Gene Family AT1G53730 66.383 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Psa4g3814 PK_Tyr_Ser-Thr 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3814 - - gmx:100780323 1045.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3814 4 320358419 320363142 Psa4g3814 4 320358419 320363142 ECH