Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3806 ATGGATGCACACAGCTCGGGGCACAGTCAAATAATTGAAATCAGTGTAGATCTTAATGATCCAGGAAGGAAGATTTGTGGGGAAGCACCATGTGGATTCTTAGATGCTGGATCCATCTCTCTGGATTCCAAAGAACGTTCAACTTCCATGCGGAAGCTTTTGATGGCAGTGGTCCTCTGTGTTATTTTCATGACCGTTGAACTAGTTGGTGGCATCAAAGCAAACAGTCTTGCAATATTGACTGATGCAGCACATCTTCTTTCTGACGTTGCAGCGTTTGCCATCTCCTTGTTTTCTTTATGGGCTGCGGGATGGGAAGCTACTCCTCGTCAATCGTACGGGTTTTATAGAATAGAGATTCTCGGTGCTTTGGTTTCTATCCAGTTAATATGGCTGCTTGCCGGGATTATTGTATACGAAGCCATAGATAGGCTCATTACTGGTTCTAAAAATGTGGATGGGTTTATAATGTTTCTAGTTGCCGCATTTGGTCTTGTGGTTAACATAATTATGGCTGTGTTATTAGGTCATGATCATGGCCACGGTCATGGTCATGGTCACGATCATGGCCATGGTCATGGCCATGACCACGGACACAGTCATCATGGTCACAGTCACGGACTTACAGTTTCTACTCATGATCTTACAAAAGACGACGAGCACCATCATCATACTCACGACAACCACACTCACCATGATGAAGAGAATCATTCAAAAGATCCACACAATCATACTCACGAAGATCACATTCACCATCACACCGGCGAAGGTGTTACTGAACCACTTCTTGCAGAATCAAAAGACAAGTCCAAGAAGAAGAGAAACATAAACGTGCAGGGCGCTTATCTCCATGTACTCGGCGACTCCATCCAAAGTATTGGAGTAATGATTGGAGGAGCAGTGATATGGTATAAACCAGAATGGAAAATAGTTGATTTAATTTGCACTCTCATATTTTCAGTAATTGTTTTAGGGACAACAATCAACATGTTGCGAAACATTTTGGAAGTTCTAATGGAAAGCACGCCTCGAGAGATCGATGCTACTCAGCTTGAAAGGGGGATATTAGATATTGAAGAAGTAGTGGCTGTTCATGAGCTGCACATTTGGGCCATTACAGTTGGGAAGATTTTATTAGCATGTCATGTTAAAATCAACCGCGATGCCGACGCAGAGGTGGTGTTGGACAAGGTTGTAGACTACATCAGAAGGGTTTATAACATCAGTCATGTAACTATACAGATAGAGCGTTAG 1254 0.4282 MDAHSSGHSQIIEISVDLNDPGRKICGEAPCGFLDAGSISLDSKERSTSMRKLLMAVVLCVIFMTVELVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFYRIEILGALVSIQLIWLLAGIIVYEAIDRLITGSKNVDGFIMFLVAAFGLVVNIIMAVLLGHDHGHGHGHGHDHGHGHGHDHGHSHHGHSHGLTVSTHDLTKDDEHHHHTHDNHTHHDEENHSKDPHNHTHEDHIHHHTGEGVTEPLLAESKDKSKKKRNINVQGAYLHVLGDSIQSIGVMIGGAVIWYKPEWKIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATQLERGILDIEEVVAVHELHIWAITVGKILLACHVKINRDADAEVVLDKVVDYIRRVYNISHVTIQIER* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3806 417 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 417 - -
Psa4g3806 417 MobiDBLite consensus disorder prediction 207 261 - -
Psa4g3806 417 PANTHER METAL TOLERANCE PROTEIN A1 1 417 - -
Psa4g3806 417 TIGRFAM CDF: cation diffusion facilitator family transporter 50 417 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Psa4g3806 417 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 345 416 IPR036837 -
Psa4g3806 417 MobiDBLite consensus disorder prediction 182 261 - -
Psa4g3806 417 Gene3D Cation efflux protein transmembrane domain 49 338 IPR027469 -
Psa4g3806 417 Pfam Cation efflux family 53 339 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Psa4g3806 417 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 340 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3806 Psa-Chr4 319880001 319883300 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3806 1 417 Inorganic Solute Cotransporters AT2G46800 66.351 1.13e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3806 K14689 - gmx:100794876 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3806 4 319880001 319883300 Psa4g3806 4 319880001 319883300 ECH