Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3803 ATGGAGGAAGAAGTTGAATTAAACAGAAATATGAATGAATCAGTGAAGAAGAAGAAGAACGATGATGATGATGATCACTGTAAAGAGGTTTTTAGATGGGAATTGTTTCTACCAAAGATAACGGTTACTGTTCTGCTTGTTGAATCCGATCGTTCTACTCGTCGCTTAATTTCATCACTTCTCAAGAATTGCAATTACAAAGTTATTGCGGTTTCTCATGGAGTAAAGGCATGGAAGATTTTGCAAAAGAAGGAAGTTGAAATTGATCTTGTTTTAACAGAAATGGAGTTGCCTGAAATATCTGGATTAGCACTTCTTGCTTTGATGATGGAGCATGAAACTTGCAAAAATATTCCTCTTATAATGATGTCTTCTCACGATTCATGTGGCATGGTAATGAATTGTATGTGTAAAGGTGCAGCTGATTTTCTAATCAAACCTATTCGGAAGAATGAGCTTACGAACATATGGCAGCATGTATGGAGAAAGCATGTTCTTAACAGGCCTCTCCAAAATACATCTGCACAAGGAAAACTTAAAATTGCCATAGAAGACAATTTTACTGGCAATCAATCGACTGATTCTGTTTCTGTGGCTTCCTCACAGAAAAATAATGAATGCAGTGAGAAGTTGAGTGAGGCTCGAAGCACACGTGCATTGCCATTTTCTGATGCTGAGAATGCATACATGGATAATATGCAAAATGCCTCTCAGATGAAGAGTTGTTTCAAATTGAGCAAAATTGGTGTGTTGAAACACGAGGAGTCTAACCAACTTGAAAGAGAATCAACTGAGCTTAATGATCAAGCAAAAGACTCAAGGCTAGAACAAGACTACAGAACTTCTGAAGTCGAATCCAAAATTGAAATATTTAGAGCTGAGCTATGCAGAGAGAACCAGGATACTGATACTGAGATACGCGGATGCAGTGATGAACTGATAGAAACTTCTAGCAAGGCTATTGACTTGATTTCCACAGTTGGGAATCTCCGAAAGTGCACTAAGGAAATCCATTGCATTAATGGTGATAAAGAAACCAAGTTTGATTTTGAAAATGAATTGGAGCTGTCTTTAAGAAGTGATTATTCAGGCAGCTCATGCAAACAAGCAAGTGAAGCAACTGAGGAATGGCAAGGATTGAACCACTCAAATACTTCTTCCTTTCCCCAGTTTGATGGTAGTAAGATGTTGTGGCCACTTTTTCAAAACTCCAATTGGAGCTCTAATAAATCTCATGAATTATCAGTAGTAACTGCTGATAATTGCATTCAATATGGTGGCCCAATTAAAATAGAAGATATGACTAATGCAGTCACGGCTCATTATGGACAATTTGGATCAAAATTATTTAACACTGGGTTCTTAGCTGATAATGTTCTCCATCACATGTGGAATCCTAAATCAAGTTTCCAAAAAGAGAGCTCTCCCTTTCCCTCAAGTTCCTCTTCCCAGTCCTATCCTGAAAGTCACAATTCAGACCATCATCATAATTGCTCTTATGATGCTAACTACAGTTTTCGTAATCAAAATGTTACTAAAAAACATGATTTGGATCATGTAGTGCATGATTCTCCTAGTGGTGGTACAGGATTCGACAATGATATTTGCCGTGCTTCGAATCATATTAATAGTGGCAATGATGAAAGACCTACTTCAAATGTGGTTACAAAGAACTCAAGAAGTTCTAGTGATTGTAGGAACTACAAAAAAGATTATTATTATGATAATGATGAATTTAGATTGAGTGATTCTCATCGCTCGAGTCAAAGAGAAGCAGCTCTAACAAAGTTTCGTTTAAAGCGAAAGAGAGATGCTACGCGAAAAAGGTTCGCTATCAGAGCCGGAAAAGAATCGCAGAGCAGCGCCTTCGGGTGA 1875 0.3771 MEEEVELNRNMNESVKKKKNDDDDDHCKEVFRWELFLPKITVTVLLVESDRSTRRLISSLLKNCNYKVIAVSHGVKAWKILQKKEVEIDLVLTEMELPEISGLALLALMMEHETCKNIPLIMMSSHDSCGMVMNCMCKGAADFLIKPIRKNELTNIWQHVWRKHVLNRPLQNTSAQGKLKIAIEDNFTGNQSTDSVSVASSQKNNECSEKLSEARSTRALPFSDAENAYMDNMQNASQMKSCFKLSKIGVLKHEESNQLERESTELNDQAKDSRLEQDYRTSEVESKIEIFRAELCRENQDTDTEIRGCSDELIETSSKAIDLISTVGNLRKCTKEIHCINGDKETKFDFENELELSLRSDYSGSSCKQASEATEEWQGLNHSNTSSFPQFDGSKMLWPLFQNSNWSSNKSHELSVVTADNCIQYGGPIKIEDMTNAVTAHYGQFGSKLFNTGFLADNVLHHMWNPKSSFQKESSPFPSSSSSQSYPESHNSDHHHNCSYDANYSFRNQNVTKKHDLDHVVHDSPSGGTGFDNDICRASNHINSGNDERPTSNVVTKNSRSSSDCRNYKKDYYYDNDEFRLSDSHRSSQREAALTKFRLKRKRDATRKRFAIRAGKESQSSAFG* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3803 624 MobiDBLite consensus disorder prediction 603 624 - -
Psa4g3803 624 SUPERFAMILY CheY-like 43 175 IPR011006 -
Psa4g3803 624 Pfam Response regulator receiver domain 44 155 IPR001789 GO:0000160
Psa4g3803 624 MobiDBLite consensus disorder prediction 194 213 - -
Psa4g3803 624 PANTHER PRR RESPONSE REGULATOR 26 241 - -
Psa4g3803 624 PANTHER PRR RESPONSE REGULATOR 279 611 - -
Psa4g3803 624 PANTHER TWO-COMPONENT RESPONSE REGULATOR 279 611 IPR045279 GO:0009736
Psa4g3803 624 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 241 IPR045279 GO:0009736
Psa4g3803 624 MobiDBLite consensus disorder prediction 471 488 - -
Psa4g3803 624 Gene3D - 42 307 - -
Psa4g3803 624 MobiDBLite consensus disorder prediction 541 562 - -
Psa4g3803 624 MobiDBLite consensus disorder prediction 256 278 - -
Psa4g3803 624 SMART REC_2 42 157 IPR001789 GO:0000160
Psa4g3803 624 Coils Coil 256 276 - -
Psa4g3803 624 MobiDBLite consensus disorder prediction 471 494 - -
Psa4g3803 624 MobiDBLite consensus disorder prediction 7 21 - -
Psa4g3803 624 MobiDBLite consensus disorder prediction 1 21 - -
Psa4g3803 624 ProSiteProfiles Response regulatory domain profile. 43 161 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3803 Psa-Chr4 319746510 319752095 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3803 15 234 Response Regulator Gene Family AT5G24470 43.304 4.77e-56 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa4g3803 Response_reg 3.1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3803 K12130 - gmx:100791698 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3803 4 319746510 319752095 Psa4g3803 4 319746510 319752095 ECH