Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3789 ATGAATGGTTTTAGTGCTAATTTATCACCAGAAGAACATGAATCCCTCAAAACTTTACCGGGTTATATTTCTTCAATACCTGATTTACCTGTGAAGCTTGACACAACATACTCACCTCAATTCCTTGGTCTCAATCCAAGCAAAGGCGCTTGGCACGACTCGAACTTTGGTAACGACGTAATTGTTGGCTTAATCGACACCGGAGTTTGGCCAGAAAGAAAATTTCCTTCTAACAATGTTCCAATTGTTTTCATGGGTTTATGTGACAATGTTAAGGAATTGAAAAAAGTGAAAAGCAAGATTGTGGTGTGTGAAGACAAGAATGGAACTAGTGCCTATGATCAACTCAATAATTTGGTTGAAGCAAAATGTTTTGGAGCTGTTTTGATTTCAAATGTCTCAGATGCATCCCTTACACAGAACTTTGCATCCATCATTATTAATCCAATCAATGGTGAAATTGTTAAAGCATACACCAAGAGTTATAACTCTAACTCTAAAAACTCTAGTTCTATAGCAAACATGTCTTTCAAGAAAACAGTTTTTGGAACAAAACCAGCCCCTAGTGTTGATTCTTATAGTTCAAGAGGTCCATCAAAAAGTTGTCCATTTGTTTTGAAACCCGACGTTACTGCGCCCGGTACTTCAATCCTAGCGGCATGGCCTACAAATGTTCTTGTTTCGCATTTGGGGACTAAAGAAGCTTTAAGCAATTTCAATATGATAAGTGGAACATCTATGGCATGTCCTCATGTTGCGGGCGTAGCCGCACTTTTAAAAGGCGCGCATAGTGATTGGAGCCCCGCGGCTATTCGGTCGGCAATTATGACAACATCAGACATACTTGACAATACTAAGAAACATATTAAAGACATTGGAAAAGGTAACAAAGTCGCAACTCCTTTCGCATTGGGAGCTGGTCATGTTAATCCTAATAGAGCACTTGATCCTGGTCTTGTTTATGATGTTGGTGTTCAAGATTATGTTAATCTTCTTTGTGCACTTAACTACTCACATAAAAACATCACTACCATCACAAGATCCTCCTCTAATGATTGCTCAAAACCTTCTTTAGATCTTAACTACCCTTCTTTTATTGCTTTCTTCGATAGTGGAAATTCTTCTTCGAAGACAATACATGAATTTCGGAGAACAGTTACCAACGTTGGTGAGGGACAAACAATTTATGTTGTTAGTATTACTCCTATTAAAGGTTTTAGTATTAGTGTTATCCCAAACAAGTTAGTGTTTCATGAGAAGAATGAAAAGTTGAGCTTCAAGTTGAGGATTGGAGTTGATAGAATGACAAAATTAAAGAAAGTGAGTTTTGGATATCTAAGTTGGATGGATGTGAAGCATGTGGTGAGGAGTCCTATTGTGATCACAACCATGAAATGA 1398 0.3777 MNGFSANLSPEEHESLKTLPGYISSIPDLPVKLDTTYSPQFLGLNPSKGAWHDSNFGNDVIVGLIDTGVWPERKFPSNNVPIVFMGLCDNVKELKKVKSKIVVCEDKNGTSAYDQLNNLVEAKCFGAVLISNVSDASLTQNFASIIINPINGEIVKAYTKSYNSNSKNSSSIANMSFKKTVFGTKPAPSVDSYSSRGPSKSCPFVLKPDVTAPGTSILAAWPTNVLVSHLGTKEALSNFNMISGTSMACPHVAGVAALLKGAHSDWSPAAIRSAIMTTSDILDNTKKHIKDIGKGNKVATPFALGAGHVNPNRALDPGLVYDVGVQDYVNLLCALNYSHKNITTITRSSSNDCSKPSLDLNYPSFIAFFDSGNSSSKTIHEFRRTVTNVGEGQTIYVVSITPIKGFSISVIPNKLVFHEKNEKLSFKLRIGVDRMTKLKKVSFGYLSWMDVKHVVRSPIVITTMK* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3789 465 Pfam Subtilase family 155 287 IPR000209 GO:0006508|GO:0008236
Psa4g3789 465 PRINTS Subtilisin serine protease family (S8) signature 57 76 IPR015500 -
Psa4g3789 465 PRINTS Subtilisin serine protease family (S8) signature 243 259 IPR015500 -
Psa4g3789 465 SUPERFAMILY Subtilisin-like 16 321 IPR036852 GO:0004252|GO:0006508
Psa4g3789 465 Gene3D - 93 182 - -
Psa4g3789 465 ProSitePatterns Serine proteases, subtilase family, serine active site. 244 254 IPR023828 -
Psa4g3789 465 Gene3D - 332 464 - -
Psa4g3789 465 Gene3D Peptidase S8/S53 domain 183 328 IPR036852 GO:0004252|GO:0006508
Psa4g3789 465 Pfam Fibronectin type-III domain 359 461 IPR041469 -
Psa4g3789 465 PANTHER PUTATIVE-RELATED 2 73 - -
Psa4g3789 465 PANTHER PUTATIVE-RELATED 75 463 - -
Psa4g3789 465 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 75 463 IPR045051 -
Psa4g3789 465 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 73 IPR045051 -
Psa4g3789 465 ProSiteProfiles Serine proteases, subtilase domain profile. 1 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3789 Psa-Chr4 317297358 317299394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3789 1 89 Subtilisin-like Serine Gene Family AT5G67090 46.316 1.81e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3789 - - gmx:100781249 534.643