Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3782 ATGGATGTGAATTTGTTAGCCATGGCAGAAATATGTGCTGTTTGTAATGATGCTGGTGTTTATTTCGACGGTCGCTTATTTCGAGCCACGGGTTTGCCAACTGAAGCTGCTCTCAAAGTTTTGGTTGAAAAGATGGGATTTCCAGATATCAAGTCAAGGAACAAGACTCGCAACATGCAAGGTTCATCAAACAACACGATGGATTGCGACACCTTGAAGCTAGGATGTAGTGAGTGGTGGAATAGAAGATCCAAACGGGTAGCTACGTTGGAGTTCGACCGTGTTAGAAAGTCAATGAGTGTTATTGTTCGCGAACCAGATGGTCAAAATCGGCTTCTTGTAAAGGGTGCTGTTGAGAGTTTATTGGAGCGAAGTTCGTTTGTGCAACTTGCGGATGGATCTCTTGTTCCAGTAGATGATCAATGTAGGGAACTACTTCTTCAAAGACTCCATGAGATGAGTTCGAAGGGGTTGCGTTGCTTGGGTTTGGCATGTAAAGACGAGTTGGGAGAATTTTCAGACTATTACGCAGACACTCATCCTGCACACAAGAAATTGCTTGATCCAACATACTATTCATCCATTGAAAGTGATTTAGTTTTTGTCGGCGTTGTTGGTTTAAGAAGAGGAGTTCATAAAGCAATTGAGGATTGCAAGCAAGCTGGTATTAGAGTTATGGTAATAACCGGAGATAACAATCAACAGCAGAGGCTATTTGTAAGGAAATCGGACTTTTCTCTAAGAGATGAAGATCTTACAGGTCAAAGTTTGACAGAAATGGAGGCAAGGTTTTCTCGCGAGCCGAGCCAAGACACAAGCAAGAAATTGTTGCAAAAGAAGCTTCAGATATGGTTGCTTGCAGATGACAATTTTAGTACATTGTTTTCAGCTATCGCTGAGGGTCGAGCTATTTACAATAACATGAAAGCATTTATAAGAAGCCACCCACGAAAAAGCGACGATGCCCTTATAAGTACTTGGGTTCTTTTTCGTTACCTAATAATTGGTTCCTATGTCGGAATCGCAACAGTTGGCATTTTTGTCTTGTGGTACACTCAAGCATCTCTTTTTGGCATCAATCTTGTCAGTGATGGACACACAGTTATAGAATTGTCACAGCTTCTCAACTGGAGGGAATGTCCTTCATGGTCTAATTTCACCGTTTCTTCATTTGACGCTGGTGGTGGTCGCTTGATCGCGTTTTCAAATCCTTGTGACTATTTTTCAGTCGGCAAAGTAAAGGCAATGACACTTTCTCTGTCTGTTTTGGTGGCAATTGAGATGTTTAATTCTTTGAATGCTCTATCAGAAGAGAATAGCTTGAGGACATTACCACCTTGGAGGAATCCTTGGCTTTTGGTAGCCATGACATTATCTTTAGGACTACATTGCCTCATACTTTACATTCCATTCCTCTCTGAAGTGTTTGGGGTTGCTCCATTAAGTTTGAAGGAGTGGTTTTTGGTGATTCTGATATCAGCACCTGTTATTCTTATTGATGAGATTCTAAAATTAGTGGTGAGAAGTCAAAGGAGGAAGACAAAAGAGAAAGAAGCATGA 1560 0.4122 MDVNLLAMAEICAVCNDAGVYFDGRLFRATGLPTEAALKVLVEKMGFPDIKSRNKTRNMQGSSNNTMDCDTLKLGCSEWWNRRSKRVATLEFDRVRKSMSVIVREPDGQNRLLVKGAVESLLERSSFVQLADGSLVPVDDQCRELLLQRLHEMSSKGLRCLGLACKDELGEFSDYYADTHPAHKKLLDPTYYSSIESDLVFVGVVGLRRGVHKAIEDCKQAGIRVMVITGDNNQQQRLFVRKSDFSLRDEDLTGQSLTEMEARFSREPSQDTSKKLLQKKLQIWLLADDNFSTLFSAIAEGRAIYNNMKAFIRSHPRKSDDALISTWVLFRYLIIGSYVGIATVGIFVLWYTQASLFGINLVSDGHTVIELSQLLNWRECPSWSNFTVSSFDAGGGRLIAFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSLNALSEENSLRTLPPWRNPWLLVAMTLSLGLHCLILYIPFLSEVFGVAPLSLKEWFLVILISAPVILIDEILKLVVRSQRRKTKEKEA* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3782 519 Pfam Cation transport ATPase (P-type) 14 127 - -
Psa4g3782 519 Gene3D - 297 313 - -
Psa4g3782 519 SUPERFAMILY Calcium ATPase, transmembrane domain M 151 511 IPR023298 -
Psa4g3782 519 Gene3D - 314 515 - -
Psa4g3782 519 Gene3D - 1 206 IPR023299 GO:0000166
Psa4g3782 519 Gene3D - 286 296 IPR023214 -
Psa4g3782 519 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 4 207 IPR023299 GO:0000166
Psa4g3782 519 PANTHER CALCIUM-TRANSPORTING ATPASE 315 512 - -
Psa4g3782 519 PANTHER CALCIUM-TRANSPORTING ATPASE 3 246 - -
Psa4g3782 519 PANTHER CALCIUM-TRANSPORTING ATPASE 285 313 - -
Psa4g3782 519 SUPERFAMILY HAD-like 197 247 IPR036412 -
Psa4g3782 519 Gene3D - 207 277 IPR023214 -
Psa4g3782 519 Pfam Cation transporting ATPase, C-terminus 311 506 IPR006068 -
Psa4g3782 519 PANTHER CALCIUM-TRANSPORTING ATPASE 2, ENDOPLASMIC RETICULUM-TYPE 315 512 - -
Psa4g3782 519 PANTHER CALCIUM-TRANSPORTING ATPASE 2, ENDOPLASMIC RETICULUM-TYPE 285 313 - -
Psa4g3782 519 PANTHER CALCIUM-TRANSPORTING ATPASE 2, ENDOPLASMIC RETICULUM-TYPE 3 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3782 Psa-Chr4 316946588 316949117 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3782 311 517 Primary Pumps ATPases(2) AT4G00900 68.571 8.87e-96 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3782 K01537 - psom:113309356 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3782 4 316946588 316949117 Psa4g3782 4 316946588 316949117 ECH