Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3781 ATGCATATGAAAGTTCCAATGGAGGAAAAGCCGTTTCCTGCATGGTCATGGTCAGTTGAGGAGTGTTTGAAAGAGTATGGTGTGAAACTGGACAAGGGTTTGAGTTCTAATGAGGTTCAGAGGCGGCGCGAGAAATACGGTTGGAACGAGCTAGCGAAAGAGAAGGGAAAGCCGTTATGGAAACTAGTGTTGGAACAATTCGACGACGTGTTGGTGAAGATACTTTTGGTTGCAGCCTTTGTATCGTTTCTTTTAGCTTACGTTCAAGGGAGTGAGTCGGGGGAGTCTGGATTCGAAGCTTATGTAGAGCCGCTCGTGATCATTTTGATCTTAGTCCTTAACGCAATTGTCGGAGTTTGGCAAGAGAATAACGCTGAAAAGGCTCTTGAAGCTCTTAAAGAGTTGCAATGTGAATCTATAAAAGTGTTGCGGGAGGGATATGCTGTTCCTGATTTGCCTGCACGAGAGCTTGTTCCGGGCGACATTGTTGAGTTGCGTGTTGGAGATAAAGTTCCGGCTGACATGAGAGTTGCAGCTTTGAAAACATCGACCTTGAGATTGGAACAAAGCTCGTTAACCGGAGAAGCAATGCCTGTTCTGAAAGGCACAAATCCTATTTTCATGGATGATTGTGAATTGCAGGCCAAAGAGAATATGGTATTTGCTGGCACAACTGTTGTCAACGGAAGCTGTCTTTGCATTGTTATTACCACAGCAATGAAAACTGAAATCGGAAAGATACAGAAACAAATACACGAGGCTTCGTTGGAGGAGAGTGATACTCCGTTGAAAAAGAAATTGGACGAATTTGGTAGCAGGCTAACAACTTCAATCGGAATAGTTTGTCTCGTTGTGTGGATTATAAACTACAAAAATTTCATTTCTTGGGATATTGTCGATGGATGGCCTTCGAACATTCAATTTTCGTTTCAGAAATGCACTTACTATTTCAAAATTGCTGTTGCTCTTGCTGTGGCTGCAATACCAGAAGGTCTTCCAGCTGTTATCACAACATGTTTAGCGCTCGGTACAAGGAAAATGGCGCAAAAGAATGCGATTGTGAGAAAGCTTCCAAGTGTTGAAACTTTGGGATGCACCACTGTGATTTGTTCCGATAAAACTGGCACGCTGACTACAAATCAAATGTCTGTGATGGAGTTCTTTACTTTAGGAGGGAAAACCACTGCTTCTAGAGTCCTTAGAGTTGAAGGGACAACTTATGATCCGAAAGACGGAGGCATTGTTGATTGGACTTGCTATAACATGGATGTGAATTTGTTAGCCATGGCAGAAATATGTGCTGTTTGTAATGATGCTGGTGTTTATTTCGACGGTCACTTATTTCGAGCCACGGGTTTGCCAACTGAAGCTGCTCTCAAAGTTTTGGTTGAAAAGATGGGATTTCCAGATATCAAGTCAAGGAACAA 1427 0.4275 MHMKVPMEEKPFPAWSWSVEECLKEYGVKLDKGLSSNEVQRRREKYGWNELAKEKGKPLWKLVLEQFDDVLVKILLVAAFVSFLLAYVQGSESGESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQCESIKVLREGYAVPDLPARELVPGDIVELRVGDKVPADMRVAALKTSTLRLEQSSLTGEAMPVLKGTNPIFMDDCELQAKENMVFAGTTVVNGSCLCIVITTAMKTEIGKIQKQIHEASLEESDTPLKKKLDEFGSRLTTSIGIVCLVVWIINYKNFISWDIVDGWPSNIQFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVMEFFTLGGKTTASRVLRVEGTTYDPKDGGIVDWTCYNMDVNLLAMAEICAVCNDAGVYFDGHLFRATGLPTEAALKVLVEKMGFPDIKSRN 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3781 475 PRINTS P-type cation-transporting ATPase superfamily signature 188 202 - -
Psa4g3781 475 PRINTS P-type cation-transporting ATPase superfamily signature 370 384 - -
Psa4g3781 475 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 307 395 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa4g3781 475 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 8 470 - -
Psa4g3781 475 Gene3D - 17 255 - -
Psa4g3781 475 SMART Cation_ATPase_N_a_2 13 87 IPR004014 -
Psa4g3781 475 Pfam E1-E2 ATPase 135 350 - -
Psa4g3781 475 Gene3D - 367 379 IPR023214 -
Psa4g3781 475 Gene3D - 65 366 - -
Psa4g3781 475 SUPERFAMILY Calcium ATPase, transmembrane domain M 13 364 IPR023298 -
Psa4g3781 475 ProSitePatterns E1-E2 ATPases phosphorylation site. 372 378 IPR018303 -
Psa4g3781 475 PANTHER CALCIUM-TRANSPORTING ATPASE 8 470 - -
Psa4g3781 475 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 377 470 IPR023299 GO:0000166
Psa4g3781 475 Gene3D - 380 442 IPR023299 GO:0000166
Psa4g3781 475 SUPERFAMILY Calcium ATPase, transduction domain A 148 250 IPR008250 -
Psa4g3781 475 Pfam Cation transporter/ATPase, N-terminus 15 82 IPR004014 -
Psa4g3781 475 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3781 Psa-Chr4 316943958 316945999 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3781 8 473 Primary Pumps ATPases(2) AT4G00900 80.728 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3781 K01537 - gmx:100792952 860.136