Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3775 ATGGAAGATTTCATCATCTCACCTTCATCATCTTCTTCCATGATACAAAACCCTTTATTACCACAAACATCAACCCTTCAACAAAAGCTTCAATTTTTACTCCAATCTCAATCCGACAATTGGGTCTATGCCATTTTGTGGCAAACAACAAAAGATGAAAAAGGTAACCCTTTCTTATCTTGGGGTGAAGGCCATTTCCAAGGAACCAAAGAAACAACAACTACTTCAAACAAACGATGTGACACAGACGCAGACACAGACACGTGTACAAATGGTGATGCTGAATGGTTCTACGTTATGTCGTTGACACGAAGCTTTTCCGTCGGTAATTCTTCTTCTATTTCTTTACCTGGTAAAGCTTTTGCCTTAGATTCTGTTCTATGGTTGAATAGTAAACAAGAGCTTCAATTTTATAACTGTGAGAGATCCAATGAAGCACACGTGCACGGAATCGAAACGTTAATTTGTATTCCAACAACCATGGGAGTTCTCGAAATGGGGTCTTCCGAAAATATCCAACAAAATTGGAACCTCGTACATCAAGCTAAATCCATGTTCCAATCATCCTCGTCAGAATCAAACTCAATCTCAAAACTAGATCTTCTTCCCACCAACCCACTTGACAAAATCCAAACATTCGACCAAAACATCTCATTCTCCGACATCGGTATCATCTCCGGCACCGGCGAGGAAACCGAGGAGACACAAAAAACGATGAACAAAAAACTACAAAAAAAACATAACATTGTTTCATCATGTTACATAGATTCTGAACATTCCGACTCAGAATATTATCCACAATTACCAACACCATCAACAACAACAAAAACAAATGATTCTTTTGAGAAACGAGAACCGAAGAAGAGAGGAAGAAAACCACTAACCGGAGTTCAAACTCCGATGAACCATGTGGAAGCAGAGAGACAGAGGAGAGAGAAACTAAACAATAGATTCTACGCTCTAAGAGCAGTGGTTCCAAACGTTTCAAGGATGGACAAAGCTTCATTGTTATCCGATGCAGTGGATTACATCAACGAGTTAAAAGCAAAAGTCGAAGAATTAGAATCAGAGAATCAAAAGGAAACAAAAAAACTGAAGATGGAAACAATCGAAAGTACAGTAACAACAACTTCAACTGTGGTGGACCAAAAAAGAACATGTAGTAGTAATAACAACAACAATGTTATCGCTTTGGAGATTGATGTGAAGATTATAGGTAACGATGCTATGGTGAGAGTTCAATCCGAGAATGTTAATCACCCTGGAGCAAGATTAATGAGTGTGTTTAAGGATTTGGAGTTTCAGGTACATCATGCGAGTATATCATGTTTTAATGAAATAATGGTTCAAGATGTTGTGGTTGTTCAACTTCCTGACGAGATGAGAAATGAAGAGAGTCTTAGATCTGCAATTCGAATGAGATTGGAACATGAATGA 1437 0.3827 MEDFIISPSSSSSMIQNPLLPQTSTLQQKLQFLLQSQSDNWVYAILWQTTKDEKGNPFLSWGEGHFQGTKETTTTSNKRCDTDADTDTCTNGDAEWFYVMSLTRSFSVGNSSSISLPGKAFALDSVLWLNSKQELQFYNCERSNEAHVHGIETLICIPTTMGVLEMGSSENIQQNWNLVHQAKSMFQSSSSESNSISKLDLLPTNPLDKIQTFDQNISFSDIGIISGTGEETEETQKTMNKKLQKKHNIVSSCYIDSEHSDSEYYPQLPTPSTTTKTNDSFEKREPKKRGRKPLTGVQTPMNHVEAERQRREKLNNRFYALRAVVPNVSRMDKASLLSDAVDYINELKAKVEELESENQKETKKLKMETIESTVTTTSTVVDQKRTCSSNNNNNVIALEIDVKIIGNDAMVRVQSENVNHPGARLMSVFKDLEFQVHHASISCFNEIMVQDVVVVQLPDEMRNEESLRSAIRMRLEHE* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3775 478 MobiDBLite consensus disorder prediction 278 292 - -
Psa4g3775 478 Coils Coil 337 371 - -
Psa4g3775 478 Pfam Helix-loop-helix DNA-binding domain 302 347 IPR011598 GO:0046983
Psa4g3775 478 PANTHER TRANSCRIPTION FACTOR BHLH14 1 475 - -
Psa4g3775 478 CDD ACT_UUR-ACR-like 419 478 - -
Psa4g3775 478 Gene3D - 297 364 IPR036638 GO:0046983
Psa4g3775 478 MobiDBLite consensus disorder prediction 266 292 - -
Psa4g3775 478 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 290 359 IPR036638 GO:0046983
Psa4g3775 478 PANTHER MYC 1 475 IPR045084 GO:0003700|GO:0006355
Psa4g3775 478 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 26 186 IPR025610 -
Psa4g3775 478 SMART finulus 304 353 IPR011598 GO:0046983
Psa4g3775 478 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 298 347 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3775 Psa-Chr4 316597582 316600118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3775 1 471 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 32.270 3.25e-86 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Psa4g3775 bHLH-MYC_N 7e-44 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3775 - K13422 gmx:100804965 468.774