Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3771 ATGCTAGCTTTAGGCACTGCTCTCAGTTTCTCATTATGGTTTATAACACAGTCGAAGATGAGTCAGATTTTTCCGTTGGCATTATTCAATTGCGGCGTTAACCTCTATATGGGTGCAATTCAATCTTTTATATATGCTATTTGTACTGAGAGAGATTGGAGCCAGTGGAAGCTTGATTGGAATTTGAGACTTTTTGACAGGAGCTTCCGCGGTACGAAAATTCATACCATATCATACATTAGTACTTGTTTGGGTATATTGGCCTCTGGAGTGTGTTTGTTCTGTTGGCTTGGTGTGTGGCATGAAAGGACCCTTTACATTACAGTCGGAAGTCTAACAGGAGCCGGCGTTGATTGTTTCGGATTATACATGTTATTATGGGCATTCCCTGCAAACGCGTCACACCATGTCGGCGTTGGTGCTTTTGTTGTCAATAACAAGAGAGAGGTGCTTGTGGTTCAGGAAACCAGTGGTAGATTTGGAGGCACAGGTGTATGGAAGATGCCTACAGGAGTTGTGAATGAAGGTGAAGATATTTGTGATGCTGAACACAGCAGATGTAGATCAATCACACTTCCTTCTAAGGAAAGAGTTCCCGGCATGCTGAATTGGCAATATATCACTTACTTGCTGCTGGCTCATGAGTCATGA 651 0.4286 MLALGTALSFSLWFITQSKMSQIFPLALFNCGVNLYMGAIQSFIYAICTERDWSQWKLDWNLRLFDRSFRGTKIHTISYISTCLGILASGVCLFCWLGVWHERTLYITVGSLTGAGVDCFGLYMLLWAFPANASHHVGVGAFVVNNKREVLVVQETSGRFGGTGVWKMPTGVVNEGEDICDAEHSRCRSITLPSKERVPGMLNWQYITYLLLAHES* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3771 216 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 130 183 - -
Psa4g3771 216 Coils Coil 212 216 - -
Psa4g3771 216 SUPERFAMILY Nudix 129 182 IPR015797 -
Psa4g3771 216 PANTHER NUDIX HYDROLASE 7 129 182 - -
Psa4g3771 216 PANTHER NUDIX HYDROLASE RELATED 129 182 IPR003293 -
Psa4g3771 216 Pfam NUDIX domain 135 180 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3771 Psa-Chr4 316262960 316265145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3771 1 128 Nodulin-like Gene Family AT1G68170 28.571 1.49e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3771 - - mtr:MTR_4g094360 112.079