Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3725 ATGATGAGTCCAAAGGAAAAGAAATTTGTGAGATTTGAAGATTGGAAGTCAGAATCATCATCTTTTAATATTTCACAATATGATTCCTCAATGGATGGATTTGAAAAAAGAAAATCTAAACCAAGTTTTAGTCCTGCAAAAAATAATGAACCGTCGAAAAAACCAGCTTCTAGGTTTACTGTTCTTGATCCACAAGGTCCACTGCTTCAAAAATGGAACAAGATCTTTGTAATAACATGTGTGATGGCAGTGTCGATGGATCCGCTGTTCTTTTACATCCCTGTGATTGATGACAAGAGAAAATGCCTTGACTTGAGTAGAACATTGAAGATTACTGCGAGTGTTCTTCGCACGTTTTTCGATCTTTTCTACATTCTTCGTATAATATTTCAGTTTCGAACCGGGTTTATTGCTCCTTCTTCGCGCGTGTTTGGAAGGGGCGAGCCCGTTGATGATCCTTTGGCTATAGCAGTGAGATACTTAAGTTCTCATTTCATCATTGATATTCTGTCAATTCTTCCCCTTCCTCAGATGGTGATTTTGGCTATGATTCCAATTCCACAATGCTCAGTTCCGTATATAGCAAAGGATTGGTTGAAGTATACAATAATAACACAGTACGCGCCGAGACTTTTGCGAATCTATCCGTTGTTCAAAGAAGTGACAAGCACTTCTGGTATATTGACTGAGACAGCATGGGCTGGAGCTGCTTATAATCTTTTTCTCTATATGCTAGCAAGTCATGTGGTTGGAGCTTTTTGGTATTTGTTTTCGATAGAATCAGAGTTGCGGTGTTGGCGCAAACGATTGAAGAGTACTGGAATTTTTGATGATTCCTCCTACTTGAGCTGTGGACGGGTTAATTCGGCTGTTTTTTCGCTTCTCAGCAACTCTACTACTTGTCCTTACAAAGAACCAGATGATATCATTGATCCAACAGTTTTTGATTTTGGAATATTTATAGACGGTCTAAAGTCTCGTGTCGTCGGTTCGACTACAGACTTTCATCATAAATTCTTCTACTGTTTTTGGTGGGGTTTGCGCAATTTAAGTTCTGTTGGGCAGAATCTGAAGACAAGTACTTATATTGGGGAGATAATCTTTGCGATCTTCATCGCCGTGTTTGGATTGGTTCTATTCGCATTACTTATTGGAAACATGCAGAAATATCTACAATCTACAACAGTTAGAGTTGAAGAGATGAGAATCAAAAGGAGGGATGCAGAACAATGGATGTGCCACCGTATGCTACCGGAGTTCATGAAGCAAAGAATTCGACGGTATGAACAATACAAATGGCAAGAAAATCGAGGTGTCGAAGAGGAGACGTTGATTCGCAACCTCCCGAAAGATCTCAGAAGAGACATAAAGAGACATCTTTGCTTAGATTTACTTAAAAAAGTGCCGATTTTTGGCAACATGGATAAACAGTTGCTAGATGCAATGTGTGATAAACTCAAACCAGTCCTTTATACCGAGAAAAGTTATGTTGTTCGCGAAGGTGATCCAGTGGACGAAATGCTCTTCATCATGCGCGGAAAACTTGCGACCGCCACAACAAATGGTGGAAGAACTGGTTTCTTTAACTCGTCGGAGCTAAAGGCTGGTGATTTTTGTGGAGAGGAGCTTCTAACATGGGCATTGGATCCTACCACTTCCTCTAACTTACCTATTTCAACGAGTACTGTGGAAACTATATCAGAAGTTGAAGCTTTTGCTCTCATGCATGATGACTTGAAGATTGTTGCTTCTCAATTTCGCCGTCTAATTAACAGAAAACAACTTCAACACACTTTTAGGTTCTATTCATTGCAATGGAGGACATGGGGAGCGCGGTTCATACAAGTAATATGGCGCCGATACAGAGAAAAAAGGGCTCAGAAAGCATTGCGTGAAGCGGAAGAAAGACAACAAAATGCTTCTGAAAATGAGGAAGAGTGTTCGCCAAGCTTTGTTTCCACTATGTATGTACAAAAGTTTGCATCTAATGCATTAAGACATTTAAGAAGTGGCAAAAGAGTGACACAGACGCAGACGCAGACACAGACACCGACACCGACACAGATAAAGAGATTACTACCACTCTTGCCTAAAAAACCAGCTGAGCCAGATTTCATTACTCAAAAGATCTAA 2133 0.4018 MMSPKEKKFVRFEDWKSESSSFNISQYDSSMDGFEKRKSKPSFSPAKNNEPSKKPASRFTVLDPQGPLLQKWNKIFVITCVMAVSMDPLFFYIPVIDDKRKCLDLSRTLKITASVLRTFFDLFYILRIIFQFRTGFIAPSSRVFGRGEPVDDPLAIAVRYLSSHFIIDILSILPLPQMVILAMIPIPQCSVPYIAKDWLKYTIITQYAPRLLRIYPLFKEVTSTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSIESELRCWRKRLKSTGIFDDSSYLSCGRVNSAVFSLLSNSTTCPYKEPDDIIDPTVFDFGIFIDGLKSRVVGSTTDFHHKFFYCFWWGLRNLSSVGQNLKTSTYIGEIIFAIFIAVFGLVLFALLIGNMQKYLQSTTVRVEEMRIKRRDAEQWMCHRMLPEFMKQRIRRYEQYKWQENRGVEEETLIRNLPKDLRRDIKRHLCLDLLKKVPIFGNMDKQLLDAMCDKLKPVLYTEKSYVVREGDPVDEMLFIMRGKLATATTNGGRTGFFNSSELKAGDFCGEELLTWALDPTTSSNLPISTSTVETISEVEAFALMHDDLKIVASQFRRLINRKQLQHTFRFYSLQWRTWGARFIQVIWRRYREKRAQKALREAEERQQNASENEEECSPSFVSTMYVQKFASNALRHLRSGKRVTQTQTQTQTPTPTQIKRLLPLLPKKPAEPDFITQKI* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3725 710 ProSiteProfiles cAMP/cGMP binding motif profile. 470 554 IPR000595 -
Psa4g3725 710 Gene3D Helix hairpin bin 397 461 - -
Psa4g3725 710 MobiDBLite consensus disorder prediction 1 57 - -
Psa4g3725 710 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 8 708 - -
Psa4g3725 710 MobiDBLite consensus disorder prediction 1 15 - -
Psa4g3725 710 SUPERFAMILY cAMP-binding domain-like 399 588 IPR018490 -
Psa4g3725 710 SUPERFAMILY Voltage-gated potassium channels 63 392 - -
Psa4g3725 710 MobiDBLite consensus disorder prediction 16 30 - -
Psa4g3725 710 Gene3D Jelly Rolls 468 588 IPR014710 -
Psa4g3725 710 Pfam Cyclic nucleotide-binding domain 490 580 IPR000595 -
Psa4g3725 710 Coils Coil 623 646 - -
Psa4g3725 710 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 8 708 - -
Psa4g3725 710 SMART cnmp_10 470 601 IPR000595 -
Psa4g3725 710 CDD CAP_ED 470 602 IPR000595 -
Psa4g3725 710 Pfam Ion transport protein 72 398 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Psa4g3725 710 Gene3D - 74 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3725 Psa-Chr4 313086119 313090149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3725 10 705 Ion Channels AT4G01010 60.391 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3725 K05391 - gmx:100795201 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3725 4 313086119 313090149 Psa4g3725 4 313086119 313090149 ECH