Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3719 ATGGAAGAGAACATTAAGTGTGAACTAAGGCAAGGTAAGGAGCTAGCAAAGCAACTTCATGGTCAAATTTTCTCTTCATCTTCTTCTTCAACATCTTCACCATCATCAAATTCATCATCACATGAAGCAAATGAGGTCTTAATTGATAAAATACTCTTGTCTATTGAGAAAGCAATCACCATGGTTAAAGATAATGTGGGAAATTTTGAGACAAAAAATGTCAACTTGATTGGTTCTCATTGTTCACATGGAAGTCCTAAAAGTGAGGTTCAAGACTCAGAGTTCAAGCACAAACATGTCTCTAAGAAAAGAAAAACCATGCCTAAGTGGACAGAACAAGTGAAGGTGTATTTAGGAACATCTTCTGAGGGGTCTATGGAGGATGGTTATAGCTGGAGAAAATATGGACAAAAGGATATTCTTGGAGCTAAATTTCCAAGAGGATATTACAGATGCACACATAGAAATGCACAAGGTTGTCTAGCTACAAAACAAGTGCAAAAATCAGAAGAAGATCCAATGATATATGAGATAACCTACAAAGGAAGACACACATGCATCCAATCTAGTCACTTGAACAAACCACACTCATCAAAATCAAATTTGAAATTTGGACAAAACAATTCACAACTCAATCAACAAATTCAACCACAAGAAGAAAAAATTCAACCAACTAGCCAAGAGAAAATTTCCACTTTTGACAACAAAGAGGATATTTTTTCATCATTCAATTTTTCTTCTCCATCAATAGGATCTCAAAATGGAGATACCAACATCTTTTTAGAGACATCGGTTGAAAACAAATTCATGGTAAATGAAAACAACAACAATATATTCTCGGAATCAAACGTTTTCACGTTGTCACAATTTGATTGGGAGAGTATTGATCTAGGCCCAAGTGAGTCAGACATCAGTGATATAATCTCATATCCAAATTCAGTTATCGATTATTCGATAGATTTAGATATCTTCAATAATTTTAACTTCGATATGGATTTTTCGAGCAACATTTACGAACTTTGA 1023 0.3431 MEENIKCELRQGKELAKQLHGQIFSSSSSSTSSPSSNSSSHEANEVLIDKILLSIEKAITMVKDNVGNFETKNVNLIGSHCSHGSPKSEVQDSEFKHKHVSKKRKTMPKWTEQVKVYLGTSSEGSMEDGYSWRKYGQKDILGAKFPRGYYRCTHRNAQGCLATKQVQKSEEDPMIYEITYKGRHTCIQSSHLNKPHSSKSNLKFGQNNSQLNQQIQPQEEKIQPTSQEKISTFDNKEDIFSSFNFSSPSIGSQNGDTNIFLETSVENKFMVNENNNNIFSESNVFTLSQFDWESIDLGPSESDISDIISYPNSVIDYSIDLDIFNNFNFDMDFSSNIYEL* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3719 340 SUPERFAMILY WRKY DNA-binding domain 124 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa4g3719 340 MobiDBLite consensus disorder prediction 20 41 - -
Psa4g3719 340 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 336 IPR044810 GO:0003700
Psa4g3719 340 Pfam WRKY DNA -binding domain 127 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g3719 340 Gene3D WRKY domain 112 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa4g3719 340 ProSiteProfiles WRKY domain profile. 121 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g3719 340 MobiDBLite consensus disorder prediction 85 106 - -
Psa4g3719 340 SMART WRKY_cls 126 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g3719 340 PANTHER WRKY TRANSCRIPTION FACTOR 46-RELATED 7 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3719 Psa-Chr4 311992943 311995635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3719 1 267 WRKY Transcription Factor Family AT2G46400 37.184 2.22e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa4g3719 WRKY 1.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3719 - - aprc:113849885 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3719 4 311992943 311995635 Psa5g1863 5 142533767 142536029 ECH
Psa4g3719 4 311992943 311995635 Psa4g3719 4 311992943 311995635 ECH
Psa4g3719 4 311992943 311995635 Psa3g0091 3 10221871 10222451 ECH