Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3696 CATATTTGATGACCTTGCATCAAACACAACCAAAGCCCTGCGAAAATCAAACCAAACCGTTGTCAGTAGATGGTGATGATGCTGAGGATTGTACTGCTGCAGTTGCACGTTCTATACCACCATCTCTACAGGAAGATCATATCAAGGATATCAACGGGTCTGTTGTTGCACAGGGGAACCCAGTATTAGGAGTCCATATCTTCTTATATTCGAAGGATGTATCTGAGATAAAATGTTTGCAAGGTTCTGCTCATGGTCCACGACAAGAAGCAGCTATGTGTCATGCTGTAACAGATGCGGACGAAAAGTTCTCATGCAATTCAATACCTTGTGGAAGTTATGAACTAGTTCCCTACTACAAGGGCAAGAACCACCTTGAAAGTTCTATTAGTAATAATCACTATGACGAGCCTAGAGGCGCAAATTCTTACCACACCAGCCAAAGAGAAGCAACCCTACTAAAGTTTCGACTGAAGAGAAAAGACAGATGCTATGATAAAAAGGTCCGATATGAAAGCCGGAAAAGACAGGCAGATAAACGTCGACAGATGGAAGGGCAGTTTGTTCGCCAATTACAAAGTGAACTTGCGGTCTGGTGA 599 0.429 YLMTLHQTQPKPCENQTKPLSVDGDDAEDCTAAVARSIPPSLQEDHIKDINGSVVAQGNPVLGVHIFLYSKDVSEIKCLQGSAHGPRQEAAMCHAVTDADEKFSCNSIPCGSYELVPYYKGKNHLESSISNNHYDEPRGANSYHTSQREATLLKFRLKRKDRCYDKKVRYESRKRQADKRRQMEGQFVRQLQSELAVW* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3696 198 MobiDBLite consensus disorder prediction 1 16 - -
Psa4g3696 198 ProSiteProfiles CCT domain profile. 148 190 IPR010402 GO:0005515
Psa4g3696 198 PANTHER NODAL MODULATOR 1-RELATED 49 123 - -
Psa4g3696 198 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 49 123 - -
Psa4g3696 198 MobiDBLite consensus disorder prediction 1 25 - -
Psa4g3696 198 Pfam CCT motif 148 190 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3696 Psa-Chr4 310261842 310262744 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3696 77 197 Response Regulator Gene Family AT2G46790 37.190 3.41e-17 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa4g3696 CCT 3.4e-11 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3696 - - gmx:100794049 132.494