Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3695 ATGCTTCATAATAATGACCTTGAGGAAAATGACTCATGTACAACTTTTGAAATGCCGTTTGTGGATGTTGACATGCCTACACATTTTGGAGTGGATGTTGACATGCCTACACATTTTAGAACTTCAACTGATTCTACTTTTTGTCATGGTTCCGATGCTCCTAGTGATTTTAGTGGCTATTATCCATCTTTGAATTGTTACCAAGGTATAGATGTTAGACCTGTTGTTACTGACATTTCTGCTTATTTACCTAATGGTGTTTATCCTAAATTCTGGAAAAATGAAGAGACAACGGGGAACATGAAGGTCGAAAAAATGGAGTTTTTAACTGATACTGCAAATATGATTGGCGGCATGCATTTGAATACCAGTGGTCAGATCCCTTTTCAGGACAGGCAATATATGCCAACAGATAGTGAATATCCTTCATTTTTTCCTGAGTTAAATGTTGGTCTTGGGGTGAAACAATTACCTGGAAATACAGAAAATTTGAATTTCAGATCCTTATACAAATCTCTTTCCATTGCCCGGGCATCAATTACCAATGGGAAGCAGTATAATTGTGGTATGAGAAAACTAGAGAGTAAGCCAACTGAATATAGAAGTATTGATGATTCTCAACTGTCTAAAAGAAGCACTGAGGGATCCCATGACGAAGATGACTGCGATACCGTATATGGCGGGAGGCACAAAACCAAAGCCACGCGACGAGCAGTACATATTACGAGTTGCATTCCAGGATCTGTCTCAGCCAAAGTCAGAAGGTCTTGGGAAAACAGTGTCAACTATTTCTTTAATACTAAAGGAAAGGCCTCCATTGCTCAAGACATGCAAAAGTGCACAAAAAGTGCATTAGAAACCTTGGATTTGGATGATGACCCACTTTCCGAGAATGGTGTAGTCAAAAAGGAATCTAACGTGTGTCAAGATACATGTAAAAGAAATGCAATCACAGGTGTGAATTTGTCGGTGCACACAAAGGGCAGGCCATCTGCAGGAACCCTTGTTGTTTGTCCAACTAGTGTCCTGCGACATCGAACCAAAGATCCTTATGAGCTTGCCAAGTATGATGTTGTTTTGACTACTTATTCAATTGTTAGCATGGAGGTCCATAAGCAGCCACTGGTTGACAAAGATGACATAGAAAAAGAAACTTATGAAGATCATGCTATGCCGAGTAAGAAAAGGAAATGCCCTTCTAGTTCAAAAAGCGGCAAGAAGAAGGCTTTGGACAACATGATGCTTGAAGATGTTGCATGCCGTCTTGCAAAAGTAGCCTGGTTTAGAGTTGTTTTGGATGAGGCCCAAAGTATAAAGAATCATAGAACTCAAGTTGCAAGGGCCTGCTGGGGTCTTCGAGCTAAGCGCAGATGGTGCTTGTCCGGAACTCCAATCCAAAATTCAATTGATGATCTCTACAGTTATGATCCTTATGCTGTGTACACATCATTCTGTTTAACAATCAAGATTCCTATCAACAGAAATCCATCAAAAGGGTATAGAAAGCTGCAAACTATCTTAAAGACGATCATGTTACGTCGGACAAAAGGAGGAACGAGATTTCTATTCCAAGCTAGAGGCCGCTTCACGTGCACAGTTTCAGGAATACGCCGATGCTGGTACTTTGAAGACAAAACTTCTCCTAATGTGACACCAAAAGCAAATGAAAATCAGATACGTGCCTCCCTCGAATTATCAGGCTCGGTCTTGGTTCACAGTGATGATTTAGATGATGATTGGGACTTTAAGGATGCTTCACCTGAAACCACATTGAACCAGGAATCTGCACAAAATATGTCTCTAATCAATCCACAGAAGTCACTGAGAATGGCTTGCAGACTGCTTCAAGGATACTGA 1857 0.406 MLHNNDLEENDSCTTFEMPFVDVDMPTHFGVDVDMPTHFRTSTDSTFCHGSDAPSDFSGYYPSLNCYQGIDVRPVVTDISAYLPNGVYPKFWKNEETTGNMKVEKMEFLTDTANMIGGMHLNTSGQIPFQDRQYMPTDSEYPSFFPELNVGLGVKQLPGNTENLNFRSLYKSLSIARASITNGKQYNCGMRKLESKPTEYRSIDDSQLSKRSTEGSHDEDDCDTVYGGRHKTKATRRAVHITSCIPGSVSAKVRRSWENSVNYFFNTKGKASIAQDMQKCTKSALETLDLDDDPLSENGVVKKESNVCQDTCKRNAITGVNLSVHTKGRPSAGTLVVCPTSVLRHRTKDPYELAKYDVVLTTYSIVSMEVHKQPLVDKDDIEKETYEDHAMPSKKRKCPSSSKSGKKKALDNMMLEDVACRLAKVAWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYDPYAVYTSFCLTIKIPINRNPSKGYRKLQTILKTIMLRRTKGGTRFLFQARGRFTCTVSGIRRCWYFEDKTSPNVTPKANENQIRASLELSGSVLVHSDDLDDDWDFKDASPETTLNQESAQNMSLINPQKSLRMACRLLQGY* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3695 618 Gene3D - 316 522 IPR038718 -
Psa4g3695 618 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 334 518 IPR027417 -
Psa4g3695 618 Pfam SNF2-related domain 340 518 IPR000330 GO:0005524|GO:0140658
Psa4g3695 618 CDD DEXDc_SHPRH-like 321 514 - -
Psa4g3695 618 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 346 517 - -
Psa4g3695 618 MobiDBLite consensus disorder prediction 385 405 - -
Psa4g3695 618 PANTHER BNAA01G36010D PROTEIN 346 517 - -
Psa4g3695 618 MobiDBLite consensus disorder prediction 198 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3695 Psa-Chr4 310184337 310186718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3695 268 517 RAD5 or RAD16-like Gene Family AT1G61140 52.921 1.79e-73 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Psa4g3695 SNF2_N 1.8e-28 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3695 - - gmx:100792901 355.525