Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3691 ATGACTTGTTTTGCTTTCTTATTTGGTAAGAAAGTGTCTTCTGATATAAGAAGAGATCCTGAAATTGATGAAGGACTTTCCGGGATTCGAATAAAAGTTTATACCTACAAAGAACTCAAAAATGCCTCGGACAATTTCAGCCCGGCTAATAAAATCGGGGAGGGTGGTTTTGGTTCTGTCTATAAGGGAGTACTAAAAGGAGGGAAGTTAGCTGCTATTAAAGTTCTTTCAACTGAATCAAAACAAGGGGTGAAGGAATTCTTGACCGAGATTAATGTGATTTCAGAAATACAGCATGAAAATTTGGTTATACTATATGGTTGTTGCGTGGAAGGAGATCACCGAATATTAGTCTACAATTATCTCGAGAACAATAGCCTTGCACAAACCCTTCTAGCTGGAGGTCACAGTAATATCTACTTCGATTGGCAAACGCGATGTAAGATATGTATTGGAGTTGCACGCGGACTTGCCTTTCTCCATGAAGAAGTACAACCACATATTGTTCACAGAGATATAAAAGCAAGCAATATTCTCCTTGACAAAGACCTTACACCTAAGATTTCAGATTTTGGTCTCGCAAAACTTATTCCATCGTATATGACTCATGTCAGCACACGCGTAGCAGGAACAATAGGCTATTTGGCACCGGAATATGCAATAAGGGGGCAGTTGACTCGTAAAGCAGATATTTACAGTTTTGGTGTCCTCCTTATAGAGATAGTCAGCGGGAGATCTAACACAAATATCAGACTACCAATTGCAGATCAATATATTCTAGAAACGACATGGGAGCTTTATGAGCGAAACAAATTGGTACAATTGGTAGACATATCACTAAACGGGGGATTCGATCCAGAGGAGGCTTGTAAGATTCTGAAGATTGCCCTTCTTTGTACTCAGGACACGCCTAAGCTCCGGCCAACCATGTCTTCTGTGGTCAAAATGCTCACCAGAGAAATTGATATTAACGAAAGTAAAATAACAAAACCGGGCTTGATTTCAGATGTTATGGATCTTAAAGTTAGAGGAGCTAAGAAAAATAAAGACATGGAGAGTACATCTTCATACAATGCTTCATCTGGCTCAGATAGCCAGGGAACTACTACTACTGTGTCATTGGCTGCTTCTTCAAGTACTGCAACAACTTCAACATTCATTATAAAACATGATAAAAGCATGTAA 1185 0.3924 MTCFAFLFGKKVSSDIRRDPEIDEGLSGIRIKVYTYKELKNASDNFSPANKIGEGGFGSVYKGVLKGGKLAAIKVLSTESKQGVKEFLTEINVISEIQHENLVILYGCCVEGDHRILVYNYLENNSLAQTLLAGGHSNIYFDWQTRCKICIGVARGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPSYMTHVSTRVAGTIGYLAPEYAIRGQLTRKADIYSFGVLLIEIVSGRSNTNIRLPIADQYILETTWELYERNKLVQLVDISLNGGFDPEEACKILKIALLCTQDTPKLRPTMSSVVKMLTREIDINESKITKPGLISDVMDLKVRGAKKNKDMESTSSYNASSGSDSQGTTTTVSLAASSSTATTSTFIIKHDKSM* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3691 394 PANTHER - 2 372 - -
Psa4g3691 394 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 372 - -
Psa4g3691 394 Gene3D Transferase(Phosphotransferase) domain 1 122 331 - -
Psa4g3691 394 SUPERFAMILY Protein kinase-like (PK-like) 28 317 IPR011009 -
Psa4g3691 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Psa4g3691 394 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Psa4g3691 394 Gene3D Phosphorylase Kinase; domain 1 18 121 - -
Psa4g3691 394 SMART serkin_6 46 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3691 394 Pfam Protein kinase domain 49 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3691 394 CDD STKc_IRAK 52 319 - -
Psa4g3691 394 ProSiteProfiles Protein kinase domain profile. 46 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3691 Psa-Chr4 309877984 309881358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3691 21 387 Receptor kinase-like Gene Family AT1G53440 50.943 1.40e-114 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa4g3691 Pkinase 6.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3691 - - gmx:100800503 580.867