Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3657 ATGGAGTGTGCATCCAAAATTGTAGAAAGGGCTGTCGATGTTGTGTTGGACCTGACTATTCGGCATGTGGGTTACATCTTCTATTACAAGGAAAATGTTAATGAGCTACGCAGTCTTGATGAAAAGCTAAGTCTTCAAAGAAAGAGGCTGGAACATGCAGTTGCTGAAACTGAGGATAATCTGGGAATAACTGAAAGTGATGTTACAGCTTGGCTTCAGAAAGTGGATAAAACTAGAACTGAAACAGAGGAGTTTCAAAATGATGAAGGCCACACGAAGACAAGGTTTTCCAGTGGTTTATTTCATTACTTCAGGAACAGGCATAGACTAGGGAGAAAAGCAAAGAAGATGTTAGTGGATGCCAAGTTATTAATAGATGAGTCAAAGTTTGATGGAGTTTCCTATCAGCAAAAGCCAACATCTATGCATGCTGCATCACTTGATGCTGGCTATGTAGAAATTGGTTCCAGAAGACATACAATTGAAAAGATAATAGAAGAACTCGAAGATTCTACAGTGAGAATGATTGGAGTGCATGGGCCAGGTGGTGTGGGTAAGAGCACGTTAATCAAAGAAATTGTTAAGAAAGCTCAAGACAAGAAGTTATTCAATGTGGTCGTTATAGTAGAAATAACTGACAATCCCAACCTTCGAAAAATCCAGGAAGAAATTGCATACGTGTTAGGATTGAGTTTGGAAGGGGAAGGTGAGAGTGTAAGAGCAGATCGTCTAAGGAGGAGGTTAAAGACAGAGAAGGAAAACACCCTTGTCGTCATGGATGACCTTTGGGACAGGATAGACTTGAATAAGATAGGGATTCCATTTGATGATGATGATATAGATGATGATTCAAGTAATATGACAATTGAAGATATGAAGGGTCCTAAGTTCACAACTGTAAAAAAAGGAAAATCTCCTGGTGATTATAAGGGGTGCAAAATTTTGCTAACTTCGAGAGATAGAAAAGTATTGTCTGATAAAATGGACGTCAAGTCAGTTTTCTGTGTGAGAGAATTAGATGATAAGGAATCTCTAATGTTGTTTAAGAAGGTGGCTGGAACACTTGATGAAATATCCACATTTAAGCAAGAGATTGTTAAGAAGTATTGTGCAGGGTTACCCATGGCAATTGTTACTGTTGGAAGGGCATTAAGAAATAAGAGTGAGTCAGTGTGGGAAGCTACACTAGAAAAACTTAAAAAAGAGGAGCTGAGTGGAGTGCAGAAATCTATGGAGATTTCTGTAAGGATGAGTTACGATCATCTAGAAAGCGAGGAAATGCGGTCCATTTTCTTACTTTGTGCTCAAATGGGTCATCAACAATTAATTATGGACTTGGTGAAGTATTGCTTTGGTTTGGGTATACTCGAAGGGGTCTATACGCTAAGGGAAGCACGTGATAGAGTATATACATCAATCCAAAAGCTAAAAGACTCGAGTTTGATGTTGGATGGTAGTTCCAATGATCATTTCAAAATGCATGATATGGTTAAAGATGCTGCTTTGTCTATAGCACACAAGGAGCAAAATGTATTTGCTTTAAGTAATAGCAAATTAGATGACTGGCCAGACAAGGACCAACTCGAAAGGTGCACCGCTGTCTCTATACGCAACTGTGATATCATTGACGAGCTTCCTAAAGTCATGCATTGTCCTCAACTTAAATTCTTCCAAATTGACAGTGATGATCCTTCTTTGCAAATACCTGAGAATTTTTTTGAAGGAATGGAAAAACTCAGGGTATTAATATTGACGGGTTTTCATTTTTCATGCTTACCATCTTCAATTAAATGCCTATTAAACCTCAGAATGCTTTGTTTGGAGCGGTGTGTTCTAGTTGACAACTTATCCATTGTAGGAGAGCTGAAAAAGTTAAGAATTCTCAGCTTTTCTGGATCTCAAATTGAAAGCTTGCCAATTGAGTTAGAACGCTTAGATAAGCTACAGTTGTTTGACATGAGCAACTGCTCCTTAATGAAAGTGGCTCAACCTAATTTCATATCAAGGTTGACTTGTTTAGAAGAGTTGTATATAAGAAAGAGCTTGATCAAAATGAAGGTAGATGGAGAGCCAAACCAAAGTCAAATTTCATTTCTTTCTCAGTTAAAACATTTGCACCAATTGAGAGTTGTAGACTTGAGCATCCCGAGTACTACAGTTTTGCCCAGGGACTTGTTCTTTGACAGATTAACAGATTACAAAATTGTGATTGGAGACTTCAAGATGCTTTCATCTGGAGATTTCAGGATGCCAAATAAGTATGAAGCGTTAAGATCTTTGGCATTGCAGCTGACAGACGGCGCTGATATTCACTCCCATAAAGGGATAAAGTTGTTGTTCAAAAGAGTTGAAAATTTGTTGTTGGGAGAGCTAAATGGTGTTCAAAATGCTTTTTATGAGTTGAATTTGGATGGATTTCCAGATCTTAAGCATTTATCCATCATAAATAATGATGGCATTGAATATATCGTTAACTCAATGGAGCTATTCCATCCTCAGAATGTTTTTCTCAATTTGGAATCTCTATGCCTCTACAGACTGAAGAACATAAAGATGTTGTGTTATACTCCAGTTACAGACGCCTCATTCGCCAAATTAAAAAGCATCAAGGTCAAGATGTGTACCCAGTTGAAGTTTCTCTTCTCCTTTTACATGGTTGGTTTTTTTGCTTGTCTAGAAACAATTGATGTTTCTGAATGTGATTCTTTGAAGGAGATTGTTGTCAAGGAAGGGCAAGCAAATTTTAATAAGATTCAGTTTCACAAGCTACGCTCTTTGACACTACAATCGTTACCATCATTTACTAGTTTTTACACCGGTGTTGAGACGCCCTCTGTAGAAGAGCAAACAACAAAAGGGGATCACATAGAAATTACTGTTGCAGAAGATGATCGCAGTGTCGTGGATCCCCTTTGTCTCTTTGGTGAACTGATTGAAATTCCAAATCTGGAGAGTTTGAAATTATCCTCAATCAAAAGCGAAAAGATATGGAGAGACCAGCCCCTGTCAAATTTCTGCTTTCAAAACTTAATAAAATTAACTGTGAAAGAATGCTATAACTTAAAATACTTATGTTCAATGTCAGTGGCTAGCAATTTTAAGAAATTGAAAGGCCTTTTTATAAGTGATTGTTGGATGATGGAGAAGATTTTTATCCGTGAAGGAGACAGTGTGGACAAGGTATGCATCTTTCCTAAGTTGGAGGAAATCCACCTAACCAAACTCAATAAGTTGACAGACATATGGCAAGTTGAAGTTGGTGCCGATTCCTTTTCTAGTCTCATTTCTGTGCAAATTGAAGGGTGTAAACAACTTAACAAGGTTTTTCCAAGTCACATGACAGGATGGTTTGGGAGTTTAGACAGCTTGAAGGTTATGATTGCATGTCGGTGGAAACCAACTCCCAAATCTAAAGCAAGTATGGGAAGAGATCCAGAAGGAATGTCTTGCTTCAAAAATCTGCGGGTTATAGAGGCTACACGCTGTAATAAACTGAGCTATCTCTTACCAGCTTCTGTGGCCAAAGATCTAAAAAGGCTTGCAGGCATTTTAGTAAATCTTTGTGATGGAATGGAGGAAATTGTTGCTTGGCATGATGGACCACAAGCACGATTAATGTTTCCTGAAGTAACCTTCATGAAACTGTACGGCCTGCCAAATGTGAAGCGTTTCTATAAGGGGGGACATATAGAATGTCCAAAACTGAAGCAGTTGGCTGTGGACTTTTGTGAGAAGCTGGACGTGTTCACAACAGAAACCACAAATGAAGAAAGACAAGCAGTTTTCTTAGCCGAAAAGGTAATCTCCAACTTGGAGTTCATGGAAACTGGCTTAAAGGAATCACTTTGGTTAAAGAGCAACAATTGGAAGTACCGAATGGACAGTATAAAAGAGCTTAGCTTACGCTCATTACGGAGTATTGAACTTCTCTACTGGTTTCTGGACAGAATGCCCAATCTAGAAAGGTTTAACTTGCTCTTCTCTCACTATAAGCTTGAAGGGTTAGTGCCAAGTGGAAACATTGTATCACAAGAAAGACTGGGAACTGTATTACAGCTCAAGACATTGACTTTGTGGTCATCGGAGATAAAGGATCTAGGACTTGACCGAGACCCACTTCTACAACGACTGGAGCATTTGCTCTTAGGTGCTTGCGACAGTTTGGTCAATATAGCCCCTTCCTCGCTATCTCTGTCCCACTTAACATATTTGGAAGTAAACTCTTGTACTGGTTTAATGAATTTAATGGCAGTCTCAACAGCTAAAAGTATGGTTCAACTTGCAACAATGAAGGTAATCCATTGTAAAGTAAAAGAAATAGTAACCAATGAAGGAAATGAAGAAGACAGAGTGATTGAAGTTGTATTTAAAAAATTGGTTTATTTAGAGCTGGTGAGATTAAAGGACCTTACAAGTTTCTGCAGATACAAGAACTGTGAATTTAAGTTCCCATCATTGGAAAGATTGATTGTGAGAGAATGCCCCAAGATGCAAACATTCACTGAGGGTCAGACAACAGCAGCAAAGCTACAAAATATACTTGCCATTGAAGGAGAAGAAGAAGAGAAACGGTATTGGGAAGGTGACTTGAATATCACTATACAGAAGATTTTCAAAGACAAGATTTCTTTCGAATACGCAGAGAAGATGGACCTTATTGATTACCCTGAATTATTAGAACAAGTATGGCATTGCAGTGATTTGGTGCAAGACTACATGTTTCGCAATTTGACATCCTTGGTGGTATCACAATGTAATAATCTAGTACATGTAATTCCATCTCATTTACTTCCTTGCTTTGAGAATTTGGAAGAGTTAAAAGTATGGGATTGCAGTGCAGTGAATGTCATATTTAATTTAAATGACACAAGGGTCACAAAAGCTTTGAGAAAATTTCGCTTGAAAAAGTTGTCATTAGATGGTCTACCAATCCTGGAGCATGTATGGGACAAAGACCCTGAAGGAAATTTTGGCCTTCACCTGCTACAAGAAATGCGTGTTGACAGATGTTATACCCTCAAATACTTGTTTCCTGCATCGGTGGCTAAAGATCTTACTAGACTTGAGGTGCTTATTGTAAATTACTGTAAAGAGTTGGTAAAAATATTTTGGAAGGATGAAATACCTGCAGAAGGAGCAACAATGGAGTTTCCTCGTCTGACCACATTACACCTAACAGATTTGCCAGGGCTCAAAGACTTTTATCCTGGTTTACATAAGCTAGAATTGCCTGTGCTAAAAGATTTGAGTATTTATCATTGTAAATTGCCGGTCCTCAAATGTCAAGAAGATCATCCCGAGGAGCAACCCCTTGTTCCAATTGAAAAGATTCCCAATATGGAGATGTTATCATTTGGTATTGGAGGCACCATTGTTATGTGGGATCGGGGGTCTTGGAAATTGCAACTTCATTGTCTGCAACGCTTTCAAGAAGAGTCAGATAGTGTTCTATATGGGTTCCTTGGCATGTTACCTGCTATAGGAAAGCTTGAATTGTACCAGGGTTCACTCAAAGAGATGTTCTGCGCTGAAAGACCTAATGCTGATTACACAAGAATTCTCTTAAACCTAAAAGAAATAATGTTGTTTAATATGTGTAATCTTAACTCCATTGGTTTAGAGCACTCTTGGCTACATCCCATTCCTGAAAATCTCCAAACATTAAAAGTAACTTCGTGTGATCGTTTAGTAAACTTGGTACCACACATGGTATCTTTGTCCAACCTTACATATTTGGATGTATACATGTGTAAAGGAATGCTATATCTGTTCACATCCTCAACAGCCAAAAGTTTGTGTCAACTCAAAGAGATGAAGATAGCATTGTGTGAATCAATGCAAGAGATAGTGTCCACAGAGGGGGTTGAGTCACATGCAGATGGGAAAATAATATTTGAGCACCTCCACACTTTGCTTCTAAAAGATTTAGACAAGTTAAGGTGCTTTTACTCTGGAAAATTTGCATTATGCTTTCCATCCCTGGAGAAAGTGTCATTGATTCGCTGCAGCTTGATGAAAACTTTCAGTCCAATCAACAAAGTAGATACAGCCATATTGTCTTCTGGAGTAACATTCAGAAGAGAAGAAACACAACAATGGGAAGGTGATCTGAATTCTACAATACTCAAGAGGTTTGAGGAAAAGATTTCCGACTATGCACCAAAAGGAACTGTTGTGAATCTCTATGATCAGCCAATACTACAGGATATATGGCATGGTTCACTGCCAGTCCCTCATACGTGCTTCAACAATTTGGAGGAATTGATTGTGGCCGGGTGTCAATTTTTATCCGAATTGCCAAATCTGGAGAGTGTTTGGAATGAAGATCCTTGTGGAATTCTAACAATAGAACTTCTAAAAATAGTATATGTTGACGAGTGTAAAAGCCTTGCAAGTTTGTTTCCAGCCTCAGTAGCCAAAGATCTTGTGAAACTTGAAGAACTACATGTGAAACATTGTGAAGAGCTGATTATTATTGTTGCAGAGAATAATGCAGACCCCAAAGGAACAAATTTGGAGCTTTCATTCCCTTGTATGATCTCATTGACATTACTAGAATTGCCAAGGATCAAGTGTTTTTACTGCTCACTGCATTTTGACATGTTGAAGATACCAACTTATCAAGAGTCACGTTCTGAAGATGAAGTAATCAGTATTGAAAAGGTATTGTTGCTTTACAACTCTCCTTGCTGCAGGATTTCAG 6703 0.3839 MECASKIVERAVDVVLDLTIRHVGYIFYYKENVNELRSLDEKLSLQRKRLEHAVAETEDNLGITESDVTAWLQKVDKTRTETEEFQNDEGHTKTRFSSGLFHYFRNRHRLGRKAKKMLVDAKLLIDESKFDGVSYQQKPTSMHAASLDAGYVEIGSRRHTIEKIIEELEDSTVRMIGVHGPGGVGKSTLIKEIVKKAQDKKLFNVVVIVEITDNPNLRKIQEEIAYVLGLSLEGEGESVRADRLRRRLKTEKENTLVVMDDLWDRIDLNKIGIPFDDDDIDDDSSNMTIEDMKGPKFTTVKKGKSPGDYKGCKILLTSRDRKVLSDKMDVKSVFCVRELDDKESLMLFKKVAGTLDEISTFKQEIVKKYCAGLPMAIVTVGRALRNKSESVWEATLEKLKKEELSGVQKSMEISVRMSYDHLESEEMRSIFLLCAQMGHQQLIMDLVKYCFGLGILEGVYTLREARDRVYTSIQKLKDSSLMLDGSSNDHFKMHDMVKDAALSIAHKEQNVFALSNSKLDDWPDKDQLERCTAVSIRNCDIIDELPKVMHCPQLKFFQIDSDDPSLQIPENFFEGMEKLRVLILTGFHFSCLPSSIKCLLNLRMLCLERCVLVDNLSIVGELKKLRILSFSGSQIESLPIELERLDKLQLFDMSNCSLMKVAQPNFISRLTCLEELYIRKSLIKMKVDGEPNQSQISFLSQLKHLHQLRVVDLSIPSTTVLPRDLFFDRLTDYKIVIGDFKMLSSGDFRMPNKYEALRSLALQLTDGADIHSHKGIKLLFKRVENLLLGELNGVQNAFYELNLDGFPDLKHLSIINNDGIEYIVNSMELFHPQNVFLNLESLCLYRLKNIKMLCYTPVTDASFAKLKSIKVKMCTQLKFLFSFYMVGFFACLETIDVSECDSLKEIVVKEGQANFNKIQFHKLRSLTLQSLPSFTSFYTGVETPSVEEQTTKGDHIEITVAEDDRSVVDPLCLFGELIEIPNLESLKLSSIKSEKIWRDQPLSNFCFQNLIKLTVKECYNLKYLCSMSVASNFKKLKGLFISDCWMMEKIFIREGDSVDKVCIFPKLEEIHLTKLNKLTDIWQVEVGADSFSSLISVQIEGCKQLNKVFPSHMTGWFGSLDSLKVMIACRWKPTPKSKASMGRDPEGMSCFKNLRVIEATRCNKLSYLLPASVAKDLKRLAGILVNLCDGMEEIVAWHDGPQARLMFPEVTFMKLYGLPNVKRFYKGGHIECPKLKQLAVDFCEKLDVFTTETTNEERQAVFLAEKVISNLEFMETGLKESLWLKSNNWKYRMDSIKELSLRSLRSIELLYWFLDRMPNLERFNLLFSHYKLEGLVPSGNIVSQERLGTVLQLKTLTLWSSEIKDLGLDRDPLLQRLEHLLLGACDSLVNIAPSSLSLSHLTYLEVNSCTGLMNLMAVSTAKSMVQLATMKVIHCKVKEIVTNEGNEEDRVIEVVFKKLVYLELVRLKDLTSFCRYKNCEFKFPSLERLIVRECPKMQTFTEGQTTAAKLQNILAIEGEEEEKRYWEGDLNITIQKIFKDKISFEYAEKMDLIDYPELLEQVWHCSDLVQDYMFRNLTSLVVSQCNNLVHVIPSHLLPCFENLEELKVWDCSAVNVIFNLNDTRVTKALRKFRLKKLSLDGLPILEHVWDKDPEGNFGLHLLQEMRVDRCYTLKYLFPASVAKDLTRLEVLIVNYCKELVKIFWKDEIPAEGATMEFPRLTTLHLTDLPGLKDFYPGLHKLELPVLKDLSIYHCKLPVLKCQEDHPEEQPLVPIEKIPNMEMLSFGIGGTIVMWDRGSWKLQLHCLQRFQEESDSVLYGFLGMLPAIGKLELYQGSLKEMFCAERPNADYTRILLNLKEIMLFNMCNLNSIGLEHSWLHPIPENLQTLKVTSCDRLVNLVPHMVSLSNLTYLDVYMCKGMLYLFTSSTAKSLCQLKEMKIALCESMQEIVSTEGVESHADGKIIFEHLHTLLLKDLDKLRCFYSGKFALCFPSLEKVSLIRCSLMKTFSPINKVDTAILSSGVTFRREETQQWEGDLNSTILKRFEEKISDYAPKGTVVNLYDQPILQDIWHGSLPVPHTCFNNLEELIVAGCQFLSELPNLESVWNEDPCGILTIELLKIVYVDECKSLASLFPASVAKDLVKLEELHVKHCEELIIIVAENNADPKGTNLELSFPCMISLTLLELPRIKCFYCSLHFDMLKIPTYQESRSEDEVISIEKVLLLYNSPCCRIS 2234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3657 2234 Gene3D Ribonuclease Inhibitor 2036 2165 IPR032675 -
Psa4g3657 2234 Gene3D Ribonuclease Inhibitor 1847 2016 IPR032675 -
Psa4g3657 2234 Gene3D Ribonuclease Inhibitor 1572 1768 IPR032675 -
Psa4g3657 2234 Gene3D Ribonuclease Inhibitor 1262 1516 IPR032675 -
Psa4g3657 2234 SUPERFAMILY L domain-like 979 1506 - -
Psa4g3657 2234 Gene3D - 136 334 IPR027417 -
Psa4g3657 2234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 434 IPR027417 -
Psa4g3657 2234 PRINTS Disease resistance protein signature 175 190 - -
Psa4g3657 2234 PRINTS Disease resistance protein signature 249 263 - -
Psa4g3657 2234 PRINTS Disease resistance protein signature 370 384 - -
Psa4g3657 2234 PRINTS Disease resistance protein signature 643 659 - -
Psa4g3657 2234 SUPERFAMILY RNI-like 1574 1950 - -
Psa4g3657 2234 SUPERFAMILY RNI-like 1965 2154 - -
Psa4g3657 2234 SMART AAA_5 172 344 IPR003593 -
Psa4g3657 2234 PANTHER RPP4C4 1202 2034 - -
Psa4g3657 2234 PANTHER RPP4C4 2095 2193 - -
Psa4g3657 2234 PANTHER RPP4C4 1 1129 - -
Psa4g3657 2234 Gene3D Ribonuclease Inhibitor 969 1188 IPR032675 -
Psa4g3657 2234 Gene3D Ribonuclease Inhibitor 563 943 IPR032675 -
Psa4g3657 2234 Pfam NB-ARC domain 309 415 IPR002182 GO:0043531
Psa4g3657 2234 Pfam NB-ARC domain 159 278 IPR002182 GO:0043531
Psa4g3657 2234 SUPERFAMILY RNI-like 1347 1697 - -
Psa4g3657 2234 Gene3D - 338 423 IPR042197 -
Psa4g3657 2234 PANTHER - 2095 2193 - -
Psa4g3657 2234 PANTHER - 1 1129 - -
Psa4g3657 2234 PANTHER - 1202 2034 - -
Psa4g3657 2234 SUPERFAMILY L domain-like 492 930 - -
Psa4g3657 2234 Coils Coil 36 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3657 Psa-Chr4 308205100 308227389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3657 152 508 WRKY Transcription Factor Family AT5G45050 24.798 4.70e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3657 - - cam:101507264 3232.2