Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3633 ATGTCTGCTCTTAGGTTTTCTCATGTAAGGTTTCTACATAGTTCAATCAAGGGTTATTTCAATTTCCAAAATGTTCAAAATTACCATTGTCACCCTAATAGGGTTTTGAATCTTGCGAGAATTTCGAGTTTTTCTGTTGATTTGTCGAGCCGTGGTTATTCCGAAGGAAAGTTAGAGTTACCTAAGAAGTTTGCTCAAAATCAGTTTGGCAATTTGGCTTCTGTATCTGGTGAAAGGGGTTTTAAAGCTGTGTTTGATTCTAGATTCTCTAGGGTATGTTTCCGGAGGAGTGTTGAATTGTCGAATGTTGCTTCGATGAGTCGTGTGTTGAATTGTCGAATGTATTCGTCGTCTTTGGGTGGGAAAGGAAGTGGGGACGGTGCAACTGAAGTGGCTGCTAGTGATAATGGTGGTGGTGGTGATTCGGTTGTTTCGGGTGATTTGGTTGAGAGGGTGAAAGATACATGGAAGAGTGTTGCAGAGACGGCTTCTTATGCTGGGGAAAAGATTAAAGAAACTTCTGATGATCTTACTCCATATGTTCAACAGTTGCTTGATTCGCATCCTTATCTTAACATGGTGGTTGTTCCAGTGGGTGGTACTTTAACGGCTACGCTAATAGGTTGGTTCTTTTTGCCGAGGATTTTGAGGAAATTTCACAAATATGGAATGCAAGGTCCCGTTGCTCTATTTCAAGGAAACATGCTTGGGGAGCCAGTTCCGTATGAGAAAAGCTTTTGGGGTGCTATGGAAGACCCAATGCGATATTTAGTTACTTTCTTGGCATTCTCACAAATTGCTGTAATGGTAGCTCCAACAGCTATAGCCTCACAATATCTTGCTCCCACTTGGAGGGGTGCAGTGATACTTTCATTTGTATGGTTTTTGCATAGATGGAAAACAAATGTTTTTGCACGGACGCTGTCCAGTCAAAGTGTACTTGGACTTGATAGGGAGAAAATGCTTGCTCTAGACAAAATCTCATCTATTGGTCTATTTGTGATTGGTATAATGGCTTTGGCTGAGGCTTGTGGCGTGGCTGTGCAATCTATTGTAACTGTTGGTGGTGTAGGAGGAGTTGCTACTGCTTTTGCTGCTAGAGACGTACTTGGCAATGTGTTCAGTGGTTTATCCATGCAATTTTCAAAGCCCTTTTCAATTGGAGATACAATAAAAGCTGGATCGATAGAGGGTCAAGTGCTGGAAATTGGTCTTACTAGCACATCATTGCTGAGTCCTGAGAAGTTCCCAGTAATTGTGCCGAACTCCTTTTTCTCGAGCCAGGTAATTGTGAACAAGTCCCGTGCCGATTATCGTGCAATTATTACCAAAATCCCCCTGCAAATTGAGGATTTAAGTAAGATTCCCCAGATATCAAATGATGTAAAAAGCATGTTAACATCAAACCCGAAAGTTTTCTTAGGAAAAGATGTTCCCTACTGTTTCATGTCGCGTATAGAAAGTTCATTTGCAGAATTGACTCTTGGATACAACCTCAAGCACATGCGCAAACATGAGTTCTACGCTGCAGAACAAGATATTCTCCTGCAAGCAGTTCAGGTCATTAAGAATCATGGTGTTGCTCTTGGCAGCACATGGAATGACACTAAGTAA 1614 0.4164 MSALRFSHVRFLHSSIKGYFNFQNVQNYHCHPNRVLNLARISSFSVDLSSRGYSEGKLELPKKFAQNQFGNLASVSGERGFKAVFDSRFSRVCFRRSVELSNVASMSRVLNCRMYSSSLGGKGSGDGATEVAASDNGGGGDSVVSGDLVERVKDTWKSVAETASYAGEKIKETSDDLTPYVQQLLDSHPYLNMVVVPVGGTLTATLIGWFFLPRILRKFHKYGMQGPVALFQGNMLGEPVPYEKSFWGAMEDPMRYLVTFLAFSQIAVMVAPTAIASQYLAPTWRGAVILSFVWFLHRWKTNVFARTLSSQSVLGLDREKMLALDKISSIGLFVIGIMALAEACGVAVQSIVTVGGVGGVATAFAARDVLGNVFSGLSMQFSKPFSIGDTIKAGSIEGQVLEIGLTSTSLLSPEKFPVIVPNSFFSSQVIVNKSRADYRAIITKIPLQIEDLSKIPQISNDVKSMLTSNPKVFLGKDVPYCFMSRIESSFAELTLGYNLKHMRKHEFYAAEQDILLQAVQVIKNHGVALGSTWNDTK* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3633 537 Pfam Mechanosensitive ion channel 326 528 IPR006685 GO:0016020|GO:0055085
Psa4g3633 537 Gene3D - 284 383 - -
Psa4g3633 537 SUPERFAMILY Sm-like ribonucleoproteins 368 433 IPR010920 -
Psa4g3633 537 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 110 535 - -
Psa4g3633 537 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL-RELATED 110 535 - -
Psa4g3633 537 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 283 367 IPR011014 GO:0016020
Psa4g3633 537 Gene3D - 384 432 IPR023408 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3633 90 536 Mechanosensitive Ion Channel Family AT4G00290 60.626 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3633 K22047 - gmx:100789047 746.503