Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3619 ATGGCTACAAGGAGACAAAGTGTGAAAGAGGTTAAATCAAACGAGGTTGGTGATACAATATATGTAGCTGTAGCTAAAGATGTGAAAGATAGCAAGTTAAATGTGGTTTGGGCTATACAAAATTCTGGAGGGAAGAGAATTTGTATTCTTCATGTGCATGTGCCATCGCCTAAGATCCCTATGATGGGTGGTAAATTTCCAGCAAGTGCACTGACAAAGCAAGAAGTTGAAGCATACAGGAAAAATGAAAGTCAAGACATGCACAAGACTCTTGATGCTTACCTTCTTATCTCTCAAAGAATGGGGGTGAGAGCAGAAAAACTTTACATTGAAATGGATTCCATTGGAAAAGGGATTATAGAACTCATCTCAAAATATAACATACAAAATCTTGTTATGGGAGCAGCTTCTGATAAATACCATTCAAGGAGAATGACTGATCTCAGATCTAAGAAAGCCATCTATGTATCTGAACAAGCTCCACCTTCTTGCCATATACAGTTTATCTGCAAAGGCTATCTTATACAGATAAGGAATACTCATGCACTCAGGGATTGTGGTTTGGATCAGTATAGAGTAGAGGGAACAACTACTTTGATGGAGCAAATGCAAAACTCTGAAGTTGGTAACTCATCTCACTTGAGATCTAGATCAGTTTCACATGATCAAGATCAGGTATCTCATCATCATAGATTAAGATCTATAAGCTCTTCTCTTGGAAGTGGAAGAAGCATGGTATCATCATGGGTTTCTTCTCCAGAAACAAGTTGGTGTCCTTCACCTTTATCAGTTGAAACATCATTGATTCCAAGTAATGGAAGTGAGAGTGTGTTGGACTTGAAAATGAGTTCCTTATCAAGTATTAAAGAGGAAGATCTTCATCACTCATCACCTCCTAGTGTGCTGGATGGAGGAATGGATAGTGTTTATGATCAGCTTGAACAGGCTATGGCTGAGGCTGAGAAGGCTAGATGGGATGTATATCAAGAAACGGTTAGGCGTCGCAAAGCTGAAAAAGATCTCATTGATGCGATACGAAAGACTAATGACAACAATATCTTGAATCAAGAAGAGATGAAACTAAGGAAAGAGTTAGAAGAAGAACTACATAAAGCAAAAGAAGAAATTCACAACATGAGAAGCCAAATAGACAAAGTCAATGAAAATCTCCAACTTGCCTTGGATCACAAGTCATCAATAGAGAATCAAATTAGTGAAGCCTCAAGAACACAATCTCTTCAACTTTTCAATGAGTTTTCTTTTCTAGAGATTGAAGAAGCAACTTGTAACTTCAAACCATCCTTAAAGATTGGTGAAGGTGGATACGGAAGTATATTTAAAGGCATCCTTCGTCACACCGAGGTGGCTATAAAAATTTTGAGTCCCATCAGCACTCAAGGACCGTCGGAGTTTCAACAAGAGGTAAAAGTATTGAGCAAGTTAAGACATCCAAATCTTATAACACTTATTGGAGTAAACCAAGAAACCAAAACTCTTGTCTATGAGTATTTACCAAATGGAAGCCTTGAAGATCATCTCATCTGCAAAGACAAAACCACTCCTCCCTTATCATGGAAGACACGAATTCGCATCGCGACAGAACTATGTTCCGCTCTAATTTTCCTCCATTCCAATAAACCTCACAGCATAATGCATGGTGACTTAAAACCTTCCAACATTCTCCTTGATGCAAACCTAGTAAGCAAGCTTAGCGACTTTGGAATCAGTCGAGTACTATCGCGCCAAGACGATTCTTCGAGTAACAATACCAATACCTTAGGAATAAAGAATGAAGTGCTGTATGGTTTAAATGGTGGAGAAATTAAATCATTGTTGGATCCTTTGGCTGGAGATTGGCCTATTGTGGAAGGTGAAAAGTTGGTTCATTTGGCTTTGAAATGTTGTGATATGAATAGAAAAAGTAGGCCAGAGCTTTGTTCTGATGTGTGGAGGGTGTTGGAATCAATGAGGGGGTTGTGA 1980 0.3874 MATRRQSVKEVKSNEVGDTIYVAVAKDVKDSKLNVVWAIQNSGGKRICILHVHVPSPKIPMMGGKFPASALTKQEVEAYRKNESQDMHKTLDAYLLISQRMGVRAEKLYIEMDSIGKGIIELISKYNIQNLVMGAASDKYHSRRMTDLRSKKAIYVSEQAPPSCHIQFICKGYLIQIRNTHALRDCGLDQYRVEGTTTLMEQMQNSEVGNSSHLRSRSVSHDQDQVSHHHRLRSISSSLGSGRSMVSSWVSSPETSWCPSPLSVETSLIPSNGSESVLDLKMSSLSSIKEEDLHHSSPPSVLDGGMDSVYDQLEQAMAEAEKARWDVYQETVRRRKAEKDLIDAIRKTNDNNILNQEEMKLRKELEEELHKAKEEIHNMRSQIDKVNENLQLALDHKSSIENQISEASRTQSLQLFNEFSFLEIEEATCNFKPSLKIGEGGYGSIFKGILRHTEVAIKILSPISTQGPSEFQQEVKVLSKLRHPNLITLIGVNQETKTLVYEYLPNGSLEDHLICKDKTTPPLSWKTRIRIATELCSALIFLHSNKPHSIMHGDLKPSNILLDANLVSKLSDFGISRVLSRQDDSSSNNTNTLGIKNEVLYGLNGGEIKSLLDPLAGDWPIVEGEKLVHLALKCCDMNRKSRPELCSDVWRVLESMRGL* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3619 659 Gene3D Phosphorylase Kinase; domain 1 400 503 - -
Psa4g3619 659 Pfam Protein kinase domain 435 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3619 659 MobiDBLite consensus disorder prediction 205 239 - -
Psa4g3619 659 CDD STK_N 19 172 - -
Psa4g3619 659 SUPERFAMILY Protein kinase-like (PK-like) 412 651 IPR011009 -
Psa4g3619 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Psa4g3619 659 Coils Coil 310 330 - -
Psa4g3619 659 Gene3D Transferase(Phosphotransferase) domain 1 504 601 - -
Psa4g3619 659 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 38 137 - -
Psa4g3619 659 Coils Coil 351 403 - -
Psa4g3619 659 ProSiteProfiles Protein kinase domain profile. 431 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3619 659 PANTHER U-BOX KINASE FAMILY PROTEIN 592 657 - -
Psa4g3619 659 PANTHER U-BOX KINASE FAMILY PROTEIN 399 592 - -
Psa4g3619 659 PANTHER U-BOX KINASE FAMILY PROTEIN 4 390 - -
Psa4g3619 659 PANTHER OS02G0152300 PROTEIN 592 657 - -
Psa4g3619 659 PANTHER OS02G0152300 PROTEIN 399 592 - -
Psa4g3619 659 PANTHER OS02G0152300 PROTEIN 4 390 - -
Psa4g3619 659 ProSitePatterns Protein kinases ATP-binding region signature. 437 458 IPR017441 GO:0005524
Psa4g3619 659 MobiDBLite consensus disorder prediction 217 231 - -
Psa4g3619 659 SMART serkin_6 431 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3619 Psa-Chr4 304117360 304120380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3619 16 658 U-box Gene Family AT2G45910 42.055 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Psa4g3619 Pkinase 1.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3619 - - mtr:MTR_8g030690 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3619 4 304117360 304120380 Psa4g3619 4 304117360 304120380 ECH
Psa4g3619 4 304117360 304120380 Psa3g2510 3 212793604 212799801 ECH
Psa3g2510 3 212793604 212799801 Psa4g3619 4 304117360 304120380 PCT