Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3612 ATGACAAAGAAATCGCAAAGACGAGCTTTGCGGTATGAGAAAGATAAATCGGGCTGTATGTGGGGATTTATCAGTATGTTTGATTTTCGCCATGGTCACTCTACTCGGAAGTTGATTGCAGATAAGAGGCGAAGTAGTAAGCATTCGGATGGTGTTGTTCATTCGAAGAATAAGTTCGAGGTGCTAAACGACATAGATGAAGTTTGTCAAGGCGATTTTGACAATGGAGAGAGTAAAAGACCAACAGTGAGAACTATTGTTAATAAGCCGAGTGTGAAGAAACTCATAGAAGAAGAGATGTTCATCGATCAAAACGCAGGGAAGGATATCAATAATTCTGAAAGGTGCAAAATCTTACTGAAGTTAGATTCCAAAAGAAAAAAGAAATCTGATGAGAAAAAACGCGATATGACCGATGATTTAAATTTGGACGCAACATCGAAATCTGAAACTTCGCATCGTCAGCACTCAAGGAAGCAATCTAAAGATAGTCTTGATCTGGATACAATAGTCGAAGAGTTTTGTAATCTAAAAGGCATTTGTTCGATGATGCATGGTAATGACGGAGAAGTAGAAAAGCATGCACAAACTAACCAGAAACAGAAGCATGCTGTTTCAGAAAAAAGTTCGAGAGATGCGATTCGTGAATTCGTGAATCAGATGATATTGAATGGGAAAGATCCAGTGGAAGCTAGAAAGTTTCTTTTCTCCGATGAACTAATGGAAGCGCTTCAGCTTATAAGTTCGGATAAGGAACTGTTTCGTGCATTTCTACAAAATCCAAATCCACTTGTATTGAAATGTGTTCAAGAGTTTGAGAATTCTCAACGAGCGAACGAGAATAACTCCGAACAAGATCAAGGCGATAAAGAACAAACTAGCGAGATTGTCAACCACAAGAAGCATAACTTTTTCAGGAAAAAGGCGAAGTCTCAATCGAAGAATTCAACAAATGAAAACGGAAATACCAACTTCTCAAATAGGATTGTTATTCTAAAGCCAGGTTCCGTTGGATTGGAAAATTCCGAAACTTCGTCTCTAGAATCTCATGATAATGCCAAGTACAACGGTCCTTCTATGAGAAGTAGTTCACATTTTTCTCTCACCGAGATAAAAAAGAAATTAAAACAGGCTATAGGAAAGGAGAGACACGGAAAAAACTTCGGTAAAGACAATGCTGGAATGAGATCTCCTAATAAAGATCATTTCTTCATTGAAAAAATCGTAAGACCTTTAACCGGTGTTACTAAAGGAGACAAAGCCGGTACAAATAAAGATTCAGAAGCGGTTGTGGATCGTGAAAAGGGTATTTATTCCAAACATGGTGTTTCTAGTTTATACATCGAGGCTAAGAAACATCTTTCCGAGATGATTGGTAGTGAAGACGAGAACATGGACTTGTCAAGTAGGCAGATTTCCAAAACCCTTGGAAGAATAATATCTTTTCCCGATTACAACTTTTCGCCATTTGGTAGTCCTGGAAGGAACTGGGAGGACCGTTTTGTGACCGCAAAGACAAGACTTCGCGATGAAAGCTTTAACAGTAAATCACAAGAAATCAAGTCGGACTCGAATTTCTCAGACGGCCTAGTTCATGTCGATAAAGAGGAAAATTATTCTCCTGCTAGAGATGAGATAGTTACCGAAGGTGATGTAGAATCTGCAAAAGAGATAACTATATTAGAATCTTCCTTAGAACTAGTTGGCCTCGGTACCGGAAATGAGGATCAAAGCCGTGATATCTTAGAAATTTCTGATAGTACAAAATGTTCTAAATATTTGGAGCAGAATGTAACAGAAGAAAAACAATCGTCATCTCCCTCCGATTCTTCAATCACTACGAAAACTAAAGAGCAAGAGATTATCTCTGACGTATCGGGACGGCCAAGTCCGGTGTCTGTTCTTGATGCGCCATTCTTAGAGGACGATGCCAGCTCCGGGAACTCCAAATGTGAACCCGCTGAAGTATCGATACGTCCACTACATGTTCAATTTGAAGAACAAGATTCTTCTCTTGTGAATCAAATCAAGAGAGAAAAATATTGTATCGAAGAAAACGAATTGATATGTGATTACATCGAAGCAGTCCTGCGAGCCTCTGAGTTAACAAGAGACCAATTGTTGATGAAATGCCTTTCGTCGGACAAGATGCTAGATCCTTCCTTGTTTGATCAGGTAGAGTTATCGCCAAACCGGCTTTGCCGTGACCCGAAACTCCTATATGACTGTATCAACGAAATTCTCATGGAGGTTTGTCACGATTACTTTGGCGCCTCACCTTTTGTATCATTTGTAAGTCCTATTATAAAGCCAACTCCAAATATGAAAACGGTTATTTCCATGGTCTCGGAAGGAGTGTGTTGGTATTTACGTTCCGTTCCCCCGCCGCACACGTTGGACAAAATTGTTAGGAAAGACATGGAAAAACGTGGAGGATGGATGGATCTTCGATTTGGAGCCGAAACAGTTGGTTCTGAAATAGGCGATGCCATTCTAGCAGACCTGATGGAAGATACAATACTTGGCTGTGTAAGCAATAACGATGACAAAAATAGCACCGATGTTTAA 2568 0.3972 MTKKSQRRALRYEKDKSGCMWGFISMFDFRHGHSTRKLIADKRRSSKHSDGVVHSKNKFEVLNDIDEVCQGDFDNGESKRPTVRTIVNKPSVKKLIEEEMFIDQNAGKDINNSERCKILLKLDSKRKKKSDEKKRDMTDDLNLDATSKSETSHRQHSRKQSKDSLDLDTIVEEFCNLKGICSMMHGNDGEVEKHAQTNQKQKHAVSEKSSRDAIREFVNQMILNGKDPVEARKFLFSDELMEALQLISSDKELFRAFLQNPNPLVLKCVQEFENSQRANENNSEQDQGDKEQTSEIVNHKKHNFFRKKAKSQSKNSTNENGNTNFSNRIVILKPGSVGLENSETSSLESHDNAKYNGPSMRSSSHFSLTEIKKKLKQAIGKERHGKNFGKDNAGMRSPNKDHFFIEKIVRPLTGVTKGDKAGTNKDSEAVVDREKGIYSKHGVSSLYIEAKKHLSEMIGSEDENMDLSSRQISKTLGRIISFPDYNFSPFGSPGRNWEDRFVTAKTRLRDESFNSKSQEIKSDSNFSDGLVHVDKEENYSPARDEIVTEGDVESAKEITILESSLELVGLGTGNEDQSRDILEISDSTKCSKYLEQNVTEEKQSSSPSDSSITTKTKEQEIISDVSGRPSPVSVLDAPFLEDDASSGNSKCEPAEVSIRPLHVQFEEQDSSLVNQIKREKYCIEENELICDYIEAVLRASELTRDQLLMKCLSSDKMLDPSLFDQVELSPNRLCRDPKLLYDCINEILMEVCHDYFGASPFVSFVSPIIKPTPNMKTVISMVSEGVCWYLRSVPPPHTLDKIVRKDMEKRGGWMDLRFGAETVGSEIGDAILADLMEDTILGCVSNNDDKNSTDV* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3612 855 MobiDBLite consensus disorder prediction 283 300 - -
Psa4g3612 855 MobiDBLite consensus disorder prediction 346 365 - -
Psa4g3612 855 MobiDBLite consensus disorder prediction 192 211 - -
Psa4g3612 855 Pfam Protein of unknown function (DUF3741) 219 262 IPR022212 -
Psa4g3612 855 MobiDBLite consensus disorder prediction 276 326 - -
Psa4g3612 855 Pfam Domain of unknown function (DUF4378) 691 838 IPR025486 -
Psa4g3612 855 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 509 849 - -
Psa4g3612 855 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 509 - -
Psa4g3612 855 MobiDBLite consensus disorder prediction 597 620 - -
Psa4g3612 855 MobiDBLite consensus disorder prediction 310 326 - -
Psa4g3612 855 PANTHER (, RELATED) 1 509 - -
Psa4g3612 855 PANTHER (, RELATED) 509 849 - -
Psa4g3612 855 MobiDBLite consensus disorder prediction 597 627 - -
Psa4g3612 855 MobiDBLite consensus disorder prediction 127 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3612 Psa-Chr4 303816726 303821947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3612 1 826 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 32.225 7.54e-107 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3612 - - mtr:MTR_8g030750 1345.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3612 4 303816726 303821947 Psa4g3612 4 303816726 303821947 ECH
Psa3g2513 3 213144809 213152190 Psa4g3612 4 303816726 303821947 PCT