Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3603 ATGGGGATTCAATGCTCGAGATTTTTTCCGTGTTGTGTGAATTCGCAAGTTAAAGCATCTGTTCTTGAAACTCCGGATGCTGAAAATGATGATAGTGAGGTTAGTAACTGGCCTATATTCCGTGAATTTACACTTGAGCAACTTAAGAATGCGACGTCTGGTTTTGCTGTCGAGAATATTGTGTCCGAGCATGGAGAGAAGGCTCCAAATGTTGTCTATAAAGGGAAGCTGGAGAATCAAATGAGAATTGCTGTTAAACGGTTTAATAGAAGTGCTTGGCCTGATACTCGACAGTTTGTGGAGGAAGCAAGAGCAGTTGGTCAGCTTCGTAACCAAAGATTGGCAAACTTGCTTGGATGTTGTTGTGAAGGAGATGATAGGTTGCTTGTCGCCGAATATATGCCAAATGAAACACTTGCAAAACACCTTTTCCATTGGGAATCACAACCTATGAAATGGGCAATGCGACTAAGGGTTGTTCTACATCTTGCACAAGCTCTAGAGTACTGCACAAGTAAAGGACGTGCTCTCTATCACGACCTCAACGCATATAGAGTTCTCTTTGACGAGGACGGTAATCCTAGGCTATCTACTTTTGGACTTATGAAAAATAGCAGGGACGGGAAAAGTTATAGCACCAATTTGGCATTTACTCCTCCAGAGTATCTCAGAACTGGGAGAGTAACACCAGAAAGCGTAATATATAGCTTTGGCACTCTTTTGCTTGACCTTCTTAGCGGAAAGCATATCCCGCCGAGTCATGCTCTTGATTTGATCCGGGACAGAAATCTTCAGATGCTGACAGATTCTTGTCTGGAAGGACAATTTTCTGATAACGATGGAACTGAGCTTGTACGCTTGGCATCTCGATGTTTGCAATATGAACCTAGAGAAAGGCCTAATCCAAAATCATTGGTGTCTGCTTTGGCTTCTCTTCAGAAAGAAACCGAGGTTCCTTCACATGTGTTGATGGGTATACCACATAGCACAAGTTTTGCTTCATTATCTCCACTTGGCGAGGCTTGTTCGAGAAAGGACTTGACCGCCATACACGAAGTTCTGGATAATCTTGGTTATAAAGATGATGAAGGAGTGGCGAATGAGTTATCATTCCAGATGTGGACTGATCAAATGCAGGACACATTGAATTGCAAGAAAAAGGGCGATGCCGCTTTCCGACAGAAAGAATTCAGAGAAGCGATCGAGTGCTACACACAGTTCATCGATGCTGGAACAATGGTTTCTCCAACAGTCTATGCACGACGTAGTTTGTGTTATCTCATAAGCGACATGGCTCAGGAAGCGCTGAACGACGCAATGCAAGCGCAGGTTGTTTCACCAATATGGCACATTGCATCTTATCTTCAATCAGTTTCACTTGCAACAGTTGGAATGGAGAATGAAGCACAAGCAGCACTTAAAGAAGGAACAACACTTGAGTCGAAGCGGAATGCAACTCCGAAACAAAAGTGA 1473 0.4331 MGIQCSRFFPCCVNSQVKASVLETPDAENDDSEVSNWPIFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRSAWPDTRQFVEEARAVGQLRNQRLANLLGCCCEGDDRLLVAEYMPNETLAKHLFHWESQPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDNDGTELVRLASRCLQYEPRERPNPKSLVSALASLQKETEVPSHVLMGIPHSTSFASLSPLGEACSRKDLTAIHEVLDNLGYKDDEGVANELSFQMWTDQMQDTLNCKKKGDAAFRQKEFREAIECYTQFIDAGTMVSPTVYARRSLCYLISDMAQEALNDAMQAQVVSPIWHIASYLQSVSLATVGMENEAQAALKEGTTLESKRNATPKQK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3603 490 ProSiteProfiles Protein kinase domain profile. 58 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3603 490 Gene3D Tetratricopeptide repeat domain 379 490 IPR011990 GO:0005515
Psa4g3603 490 Pfam Protein tyrosine and serine/threonine kinase 71 309 IPR001245 GO:0004672|GO:0006468
Psa4g3603 490 SUPERFAMILY TPR-like 380 480 IPR011990 GO:0005515
Psa4g3603 490 PANTHER LRR RECEPTOR-LIKE KINASE 1 489 - -
Psa4g3603 490 SUPERFAMILY Protein kinase-like (PK-like) 30 319 IPR011009 -
Psa4g3603 490 Gene3D Phosphorylase Kinase; domain 1 29 133 - -
Psa4g3603 490 Gene3D Transferase(Phosphotransferase) domain 1 135 327 - -
Psa4g3603 490 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 489 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3603 Psa-Chr4 302945494 302949870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3603 10 312 Glycoside Hydrolase AT3G07070 33.233 6.97e-44 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Psa4g3603 PK_Tyr_Ser-Thr 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3603 K14500 - gmx:100799260 915.605