Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa4g3539 | ATGAAGATCTTGATTATTTTGAAGGGTGTTGTTCAGGGGCATGCAAGAAACAAGGAAAAAGTGGTTGAATCTCAAGGATGGCAATACATTATTTCCTGCTTACACAATGAATCTAGAGTAATAAAGGAAGCAGTTGATTTGCTCTATGAATTGCTTCAAGACTGTTCTGGTTGGAATAAAAGTTTCTGCAAAACACTTTATGAGCATCCCAGCACGGTTAATTATCTTATTACCATTCTAAACGGACCTGTCAGCGATTCAATTGAAACTGCAGAAAAGATTTTGACGGAGCTTTTTGAAACAGACGAGGAAAACATTTGCTTGCTGTTAAGATTGGCTGGATCGAAGTCTTCAAGAATGTCAATGGCTAAAGCTATAATCAATTTCAATTTGGAAGAATCAAATTTAAAACTCCTTGGCGAGAAAGGAATTATACCTCCTTTGCTAGAAATGCTATCCGGAAGCATTGAATCGAAAGAATTGTCATTATCAGCATTGGTCAAACTAGCAGGAGTTCATGCCAATAAGGGAATTATTGCTGCATATGGAGGTGTCCCCATTATTCTAGATTTAATGTTCTCCCTTCGGACACGGGCGTTCATTAGCATTAAATGCTTTGAAATCCTTGAGAAGCTTTCTTCTTCTGATGGAATTGGTTTAGTTAAGAAGGCGGTTTTGGCAGCGCACGGTGTATCACTAATTCTTCCCCTTCTTGATTACTCTGACTCAGAAATCAGGGAAACTACCATTACTCTTCTCTTTCTTTTCTCCCAACTTGAACCAGAAGGAGTTGTTGAGTACCTCTTCAGGCCTAGAAGACTTGAAGCTTTAGTCGGGTTTCTCGAGAATGACAAAAATAATGATGTACAAGTAGCTGCTACTGGTTTACTAGCTAACCTTCCTAAATCCGAACGAAAACTCACTATGCAATTAATTGAGTTAGGTGGCCTTGATGCAATTATAAACATTTTGAAAAACGGTACAATGGAAGCAAAAGAAAATGCTCTCAATGCACTCTTTAGGTTCACAGATCCCACAGATATCAAGTTACAACGCGATTTGGTTAGACGAGGAATATATCCGCTGTTAGTAAAATTCTTCAACACTGGTTCAATGACAGCAAAGGCAAGAGCAATAGCATTCATTGGTGATCTTTCCATGAGCACTCCAAAGCTCACAGTTGTTTCAAAATCATCATTTTTCCGGTGTTATCGATCATCACAAGCTCCTCTATGCTCGGCACACGGAAGTGTGTGCAATATGAATTCCATATTTTGTCTTTTGGAAGCAAATACATTACCTGGCTTGATTAAGCTGTTACAAGAGGAGGTTCATGCAACTGCTTATGAAGCCATACAGACACTTTCCACGTTGGTTATAAAAGACTTTCCTCAGAGAGGAGCTTGTGTTTTGCACGAATCGAATGCAATGAGACCCATATTGAAAATTTTAAACTGGGGAAATGATTCTCTCAAGGCAGAAGGTCTTGGACTCTTGGAGAAGGTGTTTGTCTCAAAGGAAATGGTTGAATCATATGGCTCAATGGCTAGATTGCGTCTATTCCATCTTACTGGCATGAATGTATACGGGGACGGCCACCTAAGGAGAAAAGTTGCCAGGGTACTGTCATTGCTGGAACGCTATTCAAGATCGTCATCACATTCAATCACCGGAGTTATGTTGACTGAGTTTGGGTGCGGAAGGAAAGGAAAGATGTCATCACTGGGAACTTCAAAGGGGATTCTAGAGATCGTCAAGTTTGAGGTTTACGTTACTGTACCCATCGTTCTTATGTACGTTTATGCTAGCAATACCGACAACACCCTCCACAAGTTCATCGGAAAAAAATCATACGTTGAATATCCCAAAGATACACAAAAGCCACCACCACCAGAGGAGCTTAGAGAGATGCCAGGTTTGAGAACAGCTAATGCTGCAAAAGATGTTCTTATCGACAAAGAAATTTTTAATATCCTTTCGAAACACCTGCTTGATATTGCACCAGACCTAAAGGAATTGCAGTTTCAGGAACTGAATGAGTCACAAGCAGCAAGGGTTGCTCTGGAGTCTCTTGAATCAGATGTAAAACAAGCAAGTAATTTGGTCGAGAAGTACAGGAATAACGTCCATTTTTACTTACTTATGAAGTGTCGCTACATAGTCAAGGAAGTTAAACAAGTCATTAGGGATATCGGAAGGTCTCTAGCTGCATTGTCTCTTGCAAATACTGAAGTCCTATCAAGAATTTCTGATCAAGTCAACAGACTACAGAGTGAGATGCAAAGGACCGAGTTTGAGGCTTCACAATCTCAGTTTGACTTTGTTGACAAGTTGAACCATGGAATTAAGGAGCAAAAATTAGATCAGGCTTTTGCGAACGATATGCTCGAAGAGATAGCAAGGGCATTCGGAGTGCCAATCATTTTGCTACTCTCTCAAGCTGATACAACAAGTGATTTCGAAGAAGTTAAGAAGCAATATTTTCAAAGGGTTCAGGTAATAGAAAGATATGGTTCAAGGGAAAAATATATTCCGCCACTTAATTCTCTCTGTTGTTCGATAACTGAAGCTGTTATGGTAGATCCTGTCAGTCTTTGCACCGCTACTACATGTGAGAGATCTGCCATCGAAGTTTGGTTTGATGATGGCAATATGACTGACCCGAAAACGAAAGAGGTTCTTGAAGATACTATCTTAAGGTCGAACATTCGGTTAAGAGAATCCATAGTAGAGTGGAGAGAACTTAATTACTGCTTCAGAATAAAGTCTATCAGGGAAAACTTATTATCTAATTTTGGCTTATTATTGCATGAGTCTTTGAGTCAGATGCAGGCTCTCATAAAAGAGAATTTGATTAACAAGGATTGGATTTCTATAGGAGAACTTACTGATATTATCATCTCCATCCTTGGGAACTCTGATTCTATTGATGTCAAGATGAAGATCTTGATTACTTTGAAGGGTGTTGTTCAGGGGCATGCAAGAAACAAGGAAAAAGTGGTTGAATCTCAAGGATGGTGA | 3021 | 0.3952 | MKILIILKGVVQGHARNKEKVVESQGWQYIISCLHNESRVIKEAVDLLYELLQDCSGWNKSFCKTLYEHPSTVNYLITILNGPVSDSIETAEKILTELFETDEENICLLLRLAGSKSSRMSMAKAIINFNLEESNLKLLGEKGIIPPLLEMLSGSIESKELSLSALVKLAGVHANKGIIAAYGGVPIILDLMFSLRTRAFISIKCFEILEKLSSSDGIGLVKKAVLAAHGVSLILPLLDYSDSEIRETTITLLFLFSQLEPEGVVEYLFRPRRLEALVGFLENDKNNDVQVAATGLLANLPKSERKLTMQLIELGGLDAIINILKNGTMEAKENALNALFRFTDPTDIKLQRDLVRRGIYPLLVKFFNTGSMTAKARAIAFIGDLSMSTPKLTVVSKSSFFRCYRSSQAPLCSAHGSVCNMNSIFCLLEANTLPGLIKLLQEEVHATAYEAIQTLSTLVIKDFPQRGACVLHESNAMRPILKILNWGNDSLKAEGLGLLEKVFVSKEMVESYGSMARLRLFHLTGMNVYGDGHLRRKVARVLSLLERYSRSSSHSITGVMLTEFGCGRKGKMSSLGTSKGILEIVKFEVYVTVPIVLMYVYASNTDNTLHKFIGKKSYVEYPKDTQKPPPPEELREMPGLRTANAAKDVLIDKEIFNILSKHLLDIAPDLKELQFQELNESQAARVALESLESDVKQASNLVEKYRNNVHFYLLMKCRYIVKEVKQVIRDIGRSLAALSLANTEVLSRISDQVNRLQSEMQRTEFEASQSQFDFVDKLNHGIKEQKLDQAFANDMLEEIARAFGVPIILLLSQADTTSDFEEVKKQYFQRVQVIERYGSREKYIPPLNSLCCSITEAVMVDPVSLCTATTCERSAIEVWFDDGNMTDPKTKEVLEDTILRSNIRLRESIVEWRELNYCFRIKSIRENLLSNFGLLLHESLSQMQALIKENLINKDWISIGELTDIIISILGNSDSIDVKMKILITLKGVVQGHARNKEKVVESQGW* | 1007 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa4g3539 | 1006 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 640 | 807 | - | - | |
| Psa4g3539 | 1006 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 219 | 556 | - | - | |
| Psa4g3539 | 1006 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 807 | 1006 | - | - | |
| Psa4g3539 | 1006 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 1 | 218 | - | - | |
| Psa4g3539 | 1006 | SUPERFAMILY | RING/U-box | 832 | 916 | - | - | |
| Psa4g3539 | 1006 | SUPERFAMILY | ARM repeat | 15 | 499 | IPR016024 | - | |
| Psa4g3539 | 1006 | SMART | arm_5 | 303 | 344 | IPR000225 | GO:0005515 | |
| Psa4g3539 | 1006 | SMART | arm_5 | 420 | 460 | IPR000225 | GO:0005515 | |
| Psa4g3539 | 1006 | SMART | arm_5 | 260 | 302 | IPR000225 | GO:0005515 | |
| Psa4g3539 | 1006 | SMART | arm_5 | 132 | 171 | IPR000225 | GO:0005515 |
Showing 1 to 10 of 25 entries
Duplication type information
Functional genes information
Pathway information