Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3506 ATGAATCATATCCATCAAATTTCAAATGAAGAGAAACAACTAGAGTTTCAAGCTCATTCTAGTAATGGTTCCTTTTCAGCTTTTGAGCATTTTTACTCTGAAGTGGGTGATTCATCCAAACTTTCAGCTTATTCGGCTTCATCTGATGACTCACTGCATAGCCAGAGTTTGAAGAGTTTTCCAGTTCAGGATAAAATTTTCCTCCTGCATGGTAATTTAGATATATGTATTCATGGAGCTAAGAATCTTCCATATATGGACATGTTTCGTAAAACTGTAGGTGACATGTTTGATAAATTTCCTGGTAATGTGAGCAACAAGATTGAAGGAACAACGAGTAGGAAGATTACTAGTGGTCCTTATGTGTCAATTCTTTTGTCAAATGCTATAGTTGTACATTTTGTTGTTAAGGATAGTGGTATGGGTTGGCTTGCAATTTATTGGTATTGTGGTGATCCCGGTGGGGCAGATATACTCGG 479 0.3695 MNHIHQISNEEKQLEFQAHSSNGSFSAFEHFYSEVGDSSKLSAYSASSDDSLHSQSLKSFPVQDKIFLLHGNLDICIHGAKNLPYMDMFRKTVGDMFDKFPGNVSNKIEGTTSRKITSGPYVSILLSNAIVVHFVVKDSGMGWLAIYWYCGDPGGADIL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3506 159 PANTHER PHOSPHOLIPASE D 8 139 IPR015679 -
Psa4g3506 159 PANTHER PHOSPHOLIPASE D ALPHA 1 8 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3506 Psa-Chr4 296663311 296663874 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3506 22 139 Phospholipase D Gene Family (Wang group) AT2G42010 40.268 6.51e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3506 K01115 - gmx:100791059 127.102