Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3505 ATGGCGACTCATGATGAGGAAACCCGGCGATTTTTCAAGAATTCTTCTGTGCAAGTGCTACTTTTTCCTCGTATTCATGGAAAACGAAATAGCTGGGCCAGGCTACAGGAAGTTGGACCAATATTTACACATCATCAGAATACAGTATTTGTGGATGCCGAGGCTGAAAATAACAGAAGAAAAATTGTAGCATTTATTGGTGGACTTGATTTGTGTGACGGCCGATATGATACTCCCCACCATCCCCTCTTTAGATCACTGCAGACACTGCACATGGATGACTATCACAACCCTACTTTCACGGGTAGTACTGGTGGCTGTCCAAGGGAACCATGGCATGACTTGCATTGTAAAATTGATGGTCCAGCAGCTTACGATATTCTGACCAACTTTGAGGAGTGCTGGTTAAGAGCTGTGAAACTTACAGGGAAAAAGCGTTTGTATGATGATGCATTGCTCAAGATAGAAAGAGTTTCAAATATAATTCACGTGTCTGATACTCCTAGTGTTGGTGATGATAATCCTGAAACTTGGCATACTCAGATATTTCGTTCCATTGATTCAACCTCTGTCATGGGATTTCCGAAGGAGCCAAAAGATGCATTGGAAAAGAATCTAGTATGCGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTAAAGGCCATTCGTGCCGCGCAGCATTACATTTATATAGAGAGTCAATATTTCATTGGTTCTTCATACAATTGGAGCGAATATAAAGACCTTGGTGCAAATAATTTAATTCCAATGGAGATTGCCCTTAAGATTGCTGAAAAAATAAAGGCAAACGAGAGGTTTGCAGTATACATAATTATTCCAATGTGGCNAGCTAGTGAAAAGTTGATATGA 882 0.4048 MATHDEETRRFFKNSSVQVLLFPRIHGKRNSWARLQEVGPIFTHHQNTVFVDAEAENNRRKIVAFIGGLDLCDGRYDTPHHPLFRSLQTLHMDDYHNPTFTGSTGGCPREPWHDLHCKIDGPAAYDILTNFEECWLRAVKLTGKKRLYDDALLKIERVSNIIHVSDTPSVGDDNPETWHTQIFRSIDSTSVMGFPKEPKDALEKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIESQYFIGSSYNWSEYKDLGANNLIPMEIALKIAEKIKANERFAVYIIIPMWXASEKLI* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3505 293 SUPERFAMILY Phospholipase D/nuclease 3 156 - -
Psa4g3505 293 Gene3D Endonuclease Chain A 3 160 - -
Psa4g3505 293 PANTHER PHOSPHOLIPASE D ALPHA 1 1 287 - -
Psa4g3505 293 Pfam Phospholipase D Active site motif 42 75 IPR001736 GO:0003824
Psa4g3505 293 Gene3D Endonuclease Chain A 183 292 - -
Psa4g3505 293 PANTHER PHOSPHOLIPASE D 1 287 IPR015679 -
Psa4g3505 293 SUPERFAMILY Phospholipase D/nuclease 205 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3505 Psa-Chr4 296643078 296661439 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3505 1 286 Phospholipase D Gene Family (Wang group) AT2G42010 76.471 1.94e-162 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3505 K01115 - gmx:100805294 494.582