Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3504 ATGGACATGTTTCATAAAACTGTAGGTGACATGTTTGATAAATTTCCTGGTAATGTGAGCAACAAGATTGAAGGAACAACGAGTAGGAAGATTACTAGTGGTCCTTATGTGTCAATTCTTTTGTCAAATGCTATAGTTGGTTTTGAAGGAACAACGAGTAGGAAGATTACTAGTGGTCCTTATGTGTCAATTCTTTTGTCAAATGCTATAGTTGGTAGGACTTTTATGATTAGCAATAGAGAAAATCCTGTATGGGAGCAACACTTTTATATTCCTGTTGCACATAATGTTGCTGAAGTGCATTTTGTTGTTAAGGTTAGTGGTATGGTTGGCTCGCAACTTATTGGTATTGCGGCGATCCCAGTGGAGCAGATATACTCGGGTGAAAAAGTACTAGGGACTTACCCTATCCTTACTAGCAATGGGAAGCCTTGTAAGCAAGGTGCTGTGTTGAGTGTTTCCATTCAGTTCATTCCAGTAGAGAAGCTGACCATTTATCA 500 0.39 MDMFHKTVGDMFDKFPGNVSNKIEGTTSRKITSGPYVSILLSNAIVGFEGTTSRKITSGPYVSILLSNAIVGRTFMISNRENPVWEQHFYIPVAHNVAEVHFVVKVSGMVGSQLIGIAAIPVEQIYSGEKVLGTYPILTSNGKPCKQGAVLSVSIQFIPVEKLTIY 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3504 166 PANTHER PHOSPHOLIPASE D ALPHA 1 48 166 - -
Psa4g3504 166 PANTHER PHOSPHOLIPASE D ALPHA 1 1 47 - -
Psa4g3504 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 54 160 IPR035892 -
Psa4g3504 166 CDD C2_plant_PLD 1 158 - -
Psa4g3504 166 Pfam C2 domain 56 137 IPR000008 -
Psa4g3504 166 ProSiteProfiles C2 domain profile. 19 135 IPR000008 -
Psa4g3504 166 Gene3D C2 domain 21 164 IPR035892 -
Psa4g3504 166 PANTHER PHOSPHOLIPASE D 1 47 IPR015679 -
Psa4g3504 166 PANTHER PHOSPHOLIPASE D 48 166 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3504 Psa-Chr4 296639580 296640527 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3504 1 166 Phospholipase D Gene Family (Wang group) AT2G42010 55.422 3.51e-57 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3504 K01115 - gmx:100801286 207.608