Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3479 ATGATGAACATGTTGTTCTTGATCGTGTTTTACTTCTTCTCCATTCTATTTCTCACTCTCTTTCTTCTCATATCAATTCTCATTCTCACAACATTCATAGGACAATCCATAGGAAACTCAAAATTTCCACCAGTGAAAGGAACAGTCTTCCACCAATTAATCAACTTCAAAACACTCTTCCATTACTTAACACAAATAGCACTAACCAATCCAACTTTTAGGCTTCTTGCTCCAAACAAATCCAAGATATACACTTGCGACACACGAAATGTAGAACACATACTCAAAACCAAGTTTCACAATTACTCCAAAGGAAAGTTCAACCATGATACTATTTTTGATCTTTTCGGTGATGGGATTTTCGCGGTTGATGATGAGAAATGGAGGCATCAGAGAAAGCTTGCTAGTGTTGAGTTTTCTACTAGGGTTCTTAGAGATTTTAGCTGCAATGTTTTCAGAAGGAATGCTGCTAAGTTGGTTAGAGTTGTCTTAGGGTTTTCTAATGCAAGAATGCTCTTTGATATACAAGATATAGTAATGAAATGTACTTTGGACTCCATATTCAAAGTTGGGTTTGGAGTAGAAATACAATCTTTGGAGAGGTCAAGCAAAGAGGAAAATATCTTCATGAAGGCCTTTAATGATTCAAATGCATTAGTATTCCGACGCTATTTGGACCCTTTATGGAAGTTGAAAAGGGTTCTTAACTTTGGATCAGAAGCTTCCCTTAAGAAGAATATCAAAATAATTGATGACTTTGTGCATAGCCTAATTAAGACCAAAAGGAAACTTTTATCAGTGCAAAAGGATTTTAATGATAAAGAAGACATGCTTTCAAGATTTTTGCTGGAAAGTAAAAAGGATCCTTCAAATATGACAGATGAATATTTGAGGGATATAATTCTGAACTTTATGATTGCTGGAAAAGATACAAGTGCCAACACTTTGTCATGGTTCTTCTACATGTTATGCAAGAACCCTCTTGTACAAGAAAAAGTGGCCCAAGAAGTTATAAATGTTACTTCTACTCAAGAAACTCAACTTAATCTAGATGAGTTTGTGAACAATATCACAGATGATAATCTTGACAAAATGCATTATCTTCATGCAGCATTAACAGAAACATTGAGGCTTTACCCTGCTGTTCCAATGACTGGTAGGACAGCAGAAGAAAATGACATACTTCCTGATGGGTACATGGTGAATAAGGGAGAAACAGTGTATTACTTGTCCTATGCTATGGGAAGAATGCCTTACATTTGGGGGGATGATGCTGAAGAATTCCAACCTGAAAGATGGCTTAAGGATGGAATCTTTCAACCTGAATCTTCATTCAAATTCATTGCTTTCCATGCTGGTCCTCGTATATGCTTAGGAAAGGATTTTGCTTATAGACAGATGAAAATTGTAGCAATGGCACTTGTTAGATTCTTTCGGTTTAAACTGGCAAATGAAACAAATGATGTGACATATAGAACCATGTTCACACTTCACATTCACAAAGGCCTCCCTCTTTATGCAGTTCCAAGGTGTGATGTATATGAATAA 1548 0.3605 MMNMLFLIVFYFFSILFLTLFLLISILILTTFIGQSIGNSKFPPVKGTVFHQLINFKTLFHYLTQIALTNPTFRLLAPNKSKIYTCDTRNVEHILKTKFHNYSKGKFNHDTIFDLFGDGIFAVDDEKWRHQRKLASVEFSTRVLRDFSCNVFRRNAAKLVRVVLGFSNARMLFDIQDIVMKCTLDSIFKVGFGVEIQSLERSSKEENIFMKAFNDSNALVFRRYLDPLWKLKRVLNFGSEASLKKNIKIIDDFVHSLIKTKRKLLSVQKDFNDKEDMLSRFLLESKKDPSNMTDEYLRDIILNFMIAGKDTSANTLSWFFYMLCKNPLVQEKVAQEVINVTSTQETQLNLDEFVNNITDDNLDKMHYLHAALTETLRLYPAVPMTGRTAEENDILPDGYMVNKGETVYYLSYAMGRMPYIWGDDAEEFQPERWLKDGIFQPESSFKFIAFHAGPRICLGKDFAYRQMKIVAMALVRFFRFKLANETNDVTYRTMFTLHIHKGLPLYAVPRCDVYE* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3479 515 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g3479 515 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g3479 515 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g3479 515 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g3479 515 Gene3D Cytochrome P450 45 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g3479 515 SUPERFAMILY Cytochrome P450 49 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g3479 515 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g3479 515 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g3479 515 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g3479 515 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g3479 515 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g3479 515 PANTHER CYTOCHROME P450 7 512 - -
Psa4g3479 515 PANTHER CYTOCHROME P450, FAMILY 704, SUBFAMILY A, POLYPEPTIDE 1 7 512 - -
Psa4g3479 515 Pfam Cytochrome P450 57 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g3479 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3479 Psa-Chr4 295134686 295137248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3479 13 510 Cytochrome P450 AT2G45510 60.843 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3479 - - gmx:100792128 713.375