Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3476 ATGTGTGAAAATTCGAAACGGGAATGGTCCATCAAGGACTTTGAGATCGGAAAACCACTCGGCAAAGGAAAATTCGGTAGAGTTTACGTCGCCAGAGAAATCAAGAGTAAATATGTGATTGCGTTGAAGGTTATCTTTAAGGAACAACTAGAAAAGTATAATATTCTCCATCAACTAAGGAGGGAAATGGAGATACAGATAAGTCTTAAACATCCAAACATCTTGCGTCTGTATGGTTGGTTTTATGATGACGAGCGTGTTTTCTTGATTCTTGAGTACGCTCATAATGGTGAGCTATACAAGGAGCTTCGCAAAAGAGGTCATTTCTCAGAGAAGCAAGCTGCAAAGTACATTTTAAGCCTCACGAAGGCATTGGCATATTGTCACGAGAAGCATGTTATTCACAGAGATATCAAGCCTGAAAATTTGCTACCGATGACGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCTGTACAATCTAAAAGCAAAAGACAAACCATGTGCGGAACATTGGATTATCTAGCTCCTGAGATGGTAGAAAACAGAGGTCATGATTATGCCATTGATAATTGGACTATAGGCATCCTTTGCTATGAGTTCCTCTATGGTGTTACTCCATTTGAGGCTGAGAGTCAAAATGATACCTTCCAAAGGATAAGAAATGTTGATCTCAACTTCCCTCCTACCCCTCTTGTTTCTAGAAATGCCAAACATCTGATATGTCGGCTCCTAGAAAAAGAATCTTCAAAAAGGCTCTCACTTCAGAAGATAATGGAGCATCCTTGGATAAAAGAAAACGCGACTGATATGACTGTCGGCGAGTAG 828 0.4034 MCENSKREWSIKDFEIGKPLGKGKFGRVYVAREIKSKYVIALKVIFKEQLEKYNILHQLRREMEIQISLKHPNILRLYGWFYDDERVFLILEYAHNGELYKELRKRGHFSEKQAAKYILSLTKALAYCHEKHVIHRDIKPENLLPMTGRLKIADFGWSVQSKSKRQTMCGTLDYLAPEMVENRGHDYAIDNWTIGILCYEFLYGVTPFEAESQNDTFQRIRNVDLNFPPTPLVSRNAKHLICRLLEKESSKRLSLQKIMEHPWIKENATDMTVGE* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3476 275 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Psa4g3476 275 ProSitePatterns Protein kinases ATP-binding region signature. 20 47 IPR017441 GO:0005524
Psa4g3476 275 ProSiteProfiles Protein kinase domain profile. 14 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3476 275 PIRSF ILK 2 265 - -
Psa4g3476 275 CDD STKc_Aurora 13 265 - -
Psa4g3476 275 Pfam Protein kinase domain 14 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3476 275 SMART serkin_6 14 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3476 275 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 4 273 IPR030616 GO:0004672
Psa4g3476 275 SUPERFAMILY Protein kinase-like (PK-like) 7 269 IPR011009 -
Psa4g3476 275 Gene3D Transferase(Phosphotransferase) domain 1 98 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3476 Psa-Chr4 294872712 294875668 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3476 11 267 CBL-interacting serine-threonine protein kinases AT2G26980 36.364 6.26e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Psa4g3476 Pkinase 2e-71 CL0016