Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3463 ATGGAAGGTAGAGAAGGTATGAATCCTGGGGTAACAGTTATAGGTGCAGAAGCTCCGTCAGCTTATCATGTAGCTCCAAGGACTGAAGCTCCGAACCAGGTTCATAACCCCGAAGCAGTAGCAGCATCGGCCGCGGGAGGTGTTGCTGCCGCTGATGCTGTTCCTGTTGGTGTTGGTGTTGGTGTCAGTGTCTCACCAGTGAGTGTAGGTTTGGATGGATCAGTCAAGAAGAAAAGGGGTAGACCAAGGAAATACGGGCCAGATGGGTCTGTCAACATGCCGTTGTCACCATTGCCTATCTCATCTTCGGCCCCCCCTTCTTCTAATGACTTTTCGTCTGTGAAGCGAGGGAAACCGCAGGGGATGGAATACAAGAGGGCGAAAAAAGTTGTGATGGATCATCTTGGTGAGATGAATGGACACTCTGATGGCACAAACTTTATGCCGCATTTCATCACTGTCAATGCTGGCGAGGACATTACAAATAAGGTAATATCGTTTTCGCAACAAGGGCCGCGAGCAATATGCGTCTTATCGGCTAATGGCGTGATTTCAAATGTTACACTCCGTCACCCAGATTCTTCCGGGGGTACTTTGACTTACGAGGGTCGGTTTGAGATACTTTCCTTGGCTGGATCATTCATGCCTACTGACAACCAAGGAACAAGAAGCAGGGCAGGTGGAATGAGCGTCTCGTTGGCAAGCCCTGATGGCCGCGTAGTAGGCGGTGGAGTTGCTGGTGTTCTTATAGCTGCCACTCCTGTGCAGGTGGTGGTGGGAAGTTTTCTACCAAGCGGCCAAGAACAGAAACTAAAGAAGCCAAAGGCTGCTGATTATGCAGCAGCCACATTTACTCAAGCGACCGAAGTATCCGCAGAGCCGCCACCAGCCCAACCTAGTAATGCTGAAAAAGAGGATGTCATGGGTGGCGGTGGACATGGCGGTGGACATGTACTTCAAAATTCTGGAACCACAACCACCCTTAACTCAAATTTTACCTCTCCTCCACCTCCCACCGCCTTTCGAAGAGACAACTGGGTCAACATGCACGCCATGCCGGACACAAGAAAGTCCCCTACTGATATAAACATATCTTTGCCTGATAGTTAA 1110 0.5 MEGREGMNPGVTVIGAEAPSAYHVAPRTEAPNQVHNPEAVAASAAGGVAAADAVPVGVGVGVSVSPVSVGLDGSVKKKRGRPRKYGPDGSVNMPLSPLPISSSAPPSSNDFSSVKRGKPQGMEYKRAKKVVMDHLGEMNGHSDGTNFMPHFITVNAGEDITNKVISFSQQGPRAICVLSANGVISNVTLRHPDSSGGTLTYEGRFEILSLAGSFMPTDNQGTRSRAGGMSVSLASPDGRVVGGGVAGVLIAATPVQVVVGSFLPSGQEQKLKKPKAADYAAATFTQATEVSAEPPPAQPSNAEKEDVMGGGGHGGGHVLQNSGTTTTLNSNFTSPPPPTAFRRDNWVNMHAMPDTRKSPTDINISLPDS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3463 369 ProSiteProfiles PPC domain profile profile. 144 285 IPR005175 -
Psa4g3463 369 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 368 IPR039605 GO:0003680
Psa4g3463 369 MobiDBLite consensus disorder prediction 95 115 - -
Psa4g3463 369 Gene3D - 149 278 - -
Psa4g3463 369 CDD DUF296 149 262 IPR005175 -
Psa4g3463 369 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 368 - -
Psa4g3463 369 SUPERFAMILY AF0104/ALDC/Ptd012-like 147 269 - -
Psa4g3463 369 MobiDBLite consensus disorder prediction 286 308 - -
Psa4g3463 369 Pfam Plants and Prokaryotes Conserved (PCC) domain 149 262 IPR005175 -
Psa4g3463 369 MobiDBLite consensus disorder prediction 73 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3463 Psa-Chr4 293644722 293649894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3463 6 292 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 55.298 1.33e-88 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3463 - - gmx:100793726 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3463 4 293644722 293649894 Psa4g3463 4 293644722 293649894 ECH
Psa3g2677 3 224862953 224866110 Psa4g3463 4 293644722 293649894 PCT