Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3429 ATGGCTCACAAAATTACCAAAAAAGAAGAAACTGAATTCAAGGTTCCCGAAACCATCACACCATGCATCAATCCTCCAACAACCACCACCACAACCCCCGCCATGGCCACTGTAGCAGAACCGTCTAGATTTTTTGAAGACAATTCCACGGCCAGATCCGCCACGTCATCACGTTCTCCGAAAAGATCTCATCCTAGCGACGACGATTCACAAGTCCAGCCCCAAACGACGTCGTCGGAAGCTAAACGCGCTGTTAACCGTTGTTCTGGCTGTCGAAAGAGAGTCGGTCTCACAGGATTCCGTTGCCGTTGCGGTGATCTTTTCTGCTCCCAACACCGTTACTCCGATCGTCATGACTGTTCCTACGATTACAAAGCGGCCGGACGGGAAACTATTGCTAGAGAAAATCCTGTTGTCAGAGCAGCAAAGATCGTTAAGCTCTGA 444 0.4955 MAHKITKKEETEFKVPETITPCINPPTTTTTTPAMATVAEPSRFFEDNSTARSATSSRSPKRSHPSDDDSQVQPQTTSSEAKRAVNRCSGCRKRVGLTGFRCRCGDLFCSQHRYSDRHDCSYDYKAAGRETIARENPVVRAAKIVKL* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3429 147 MobiDBLite consensus disorder prediction 21 60 - -
Psa4g3429 147 Gene3D - 49 143 IPR035896 -
Psa4g3429 147 SUPERFAMILY AN1-like Zinc finger 71 141 IPR035896 -
Psa4g3429 147 MobiDBLite consensus disorder prediction 1 15 - -
Psa4g3429 147 PANTHER AN1-LIKE ZINC FINGER PROTEIN 1 146 - -
Psa4g3429 147 MobiDBLite consensus disorder prediction 1 85 - -
Psa4g3429 147 SMART AN1_Zf_4 88 125 IPR000058 GO:0008270
Psa4g3429 147 MobiDBLite consensus disorder prediction 69 84 - -
Psa4g3429 147 ProSiteProfiles Zinc finger AN1-type profile. 82 128 IPR000058 GO:0008270
Psa4g3429 147 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 146 - -
Psa4g3429 147 Pfam AN1-like Zinc finger 88 125 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3429 Psa-Chr4 291345441 291347763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3429 76 147 C2H2 Transcription Factor Family AT3G52800 59.722 3.10e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3429 - - lja:Lj3g3v0478150.1 195.282