Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3398 GAGCTTGCATATTAGTCCTTTTTTTGCTGTTTTTACATCATCAGCTTATGGAGATGGCGCAAGAAGCACAAAGAAAGGGTTTCTGGAGAGAAGAAAAGATGCCCTGCAAGAGCAAGTGGAGGCTCCCTGATGGATCATTGGATGAGAACATGTACCGAAAAGAAGCCGAATCGCTAGGCAAAATAAAGCACAGAAATATAACTGTTCTCAGAGATTTCGAAGCCCATTTATCAGATTTCGAGTTAGAAAGACTAACAGTAGCAACTCAAGGAGAAGCAGCCTCCAGTTCATCTTCAGTTGGCACTTTAGGTTACGTTTTGCCAGAAGCAATCTTAATCAGCGAAGTCACGAAAGAGTCTGATGTTTACAGCTTTGGCATTGTGTTGTTGGAACTCCTAACAGGAAAGAGACCAGTAATGTGTTACAGTCAGCAATTTGAAACCCGTCCTAAGGAATTGGAGTGCTGCACTACTGTACCATCTTACTCGTACCGATCCAAGGATTTGCCATTTTGCCTATTTGTGCAGACTGTATCATTTGTTGCCTTCAATAAGGTGATTACTGCACAGTACTTTGTTTGGTTCTTTAGCTTGTTGCCTCTAATACTCCCTTGGAGTAAAATGAAGCTAAAATGGGGTGGATTGTCTTGCATTCTTCTGTGGATCGGAGCTCAGACCCACTGGTTAATGTGGGGCTACCTTCTCGAGTTCAAGGGTAAAAATGTCTTCTTACAGCTTTGGGTGGCAGGCTTAATGTTTCTTGCAGCCAACATATTCATCCTGGTCATGATTATTCGTCAACATAAATATTCATCTGTTTTCAAAGCTTTAGAGTATACCCACTCCAAACATACAGCTAAGCTCGAGTGA 869 0.42 ACILVLFLLFLHHQLMEMAQEAQRKGFWREEKMPCKSKWRLPDGSLDENMYRKEAESLGKIKHRNITVLRDFEAHLSDFELERLTVATQGEAASSSSSVGTLGYVLPEAILISEVTKESDVYSFGIVLLELLTGKRPVMCYSQQFETRPKELECCTTVPSYSYRSKDLPFCLFVQTVSFVAFNKVITAQYFVWFFSLLPLILPWSKMKLKWGGLSCILLWIGAQTHWLMWGYLLEFKGKNVFLQLWVAGLMFLAANIFILVMIIRQHKYSSVFKALEYTHSKHTAKLE* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3398 288 PANTHER PIG-M MANNOSYLTRANSFERASE 156 280 IPR007704 GO:0004376|GO:0006506|GO:0016021|GO:0051751
Psa4g3398 288 ProSiteProfiles Protein kinase domain profile. 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3398 288 Pfam Protein kinase domain 61 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3398 288 Pfam Mannosyltransferase (PIG-M) 157 264 IPR007704 GO:0004376|GO:0006506|GO:0016021|GO:0051751
Psa4g3398 288 Gene3D Transferase(Phosphotransferase) domain 1 59 167 - -
Psa4g3398 288 SUPERFAMILY Protein kinase-like (PK-like) 60 164 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3398 Psa-Chr4 288665451 288667891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3398 165 288 Glycosyltransferase AT5G22130 66.935 3.01e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Psa4g3398 Mannosyl_trans 1.8e-34 CL0111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3398 K05284 - gmx:100786062 231.876