Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3380 ATGGAGTTGCAGGGTGGTAGAATAGACTCAAGAAGTGGATTTTGTAGCTCTAATTCAATCTTTTACAGCAAGAGACAACCCATCTCACTCCCTCCAAACCACTCCTTAGACGCCACCACTTTCATATCCTCTCATGCACATCACGGCCACACCGCCTATATCGACGCCTCCACCGGCCGCCACTTGACCTACACACAGCTCTGGAGATCCGTTGAAGCTGTCACCTCCTCTCTCTCCAACATGGGAATCAAAAAGGGAGATGTTATACTTATTCTCTCTCCCAACTCCATCTACTTCCCTGTTGTGTGTCTCTCCGTCATGTCCCTTGGAGCCATCATCACCACCACTAACCCCCTCAACACAACTAGTGAAATCGCAAAGCAGATCGCAGATTCCAAACCTGTTCTCGCCTTCACAATCTCTTCATTGGTTTCGAAAATCAACGCAGCATCGCCGACTCTTCCAATTATTCTCATGGATGTTAATGGAGAGTCCTCGTCGTCGTCATCATCATCATCATCAAATTCAATCACACTAGAGGAAATGATGAAGAAAGAACTAGAGTTGACAAGTGTGAGGGAGCGAATCAACAAGGATGACACAGCTACTCTACTTTACTCATCTGGAACAACGGGACCAAGCAAAGGAGTAGTATCATCGCACAAGAACCTTATAGCGATGGTTCAAAATGTGTTAACTAGGTTTAGCAAACAAGAAGAAACATTCATTTGCACTGTTCCCATGTTTCACATATATGGTCTAGGGGTTTTCGCTACCGGGCTTCTAGCTCTAGGTTCAACCATTGTTATTCTCTCCAAATTTGAAATGGACCACATGCTTTCATCCATTGAGAGATACAGAGTTAATGTGCTACCTCTTGTGCCGCCGATATTTGTCGTTATGCTTAACAACGCAGATGCGATTAAGAGGAAGCACGACTTGAGTTCCCTTCATACGGTGCTCTGTGGTGGGGCTCCTTTGAGTAAGGAAGTTATCGAAGGGTTTATTGAGAAATATCGTAACGTTGTCATTCGTCAGGGTTATGGTCTGACGGAATCGTCGGGAATTGGGAGTTCGACTGACTGTTTGGAAGAGACTCGGAAGTATGGGACGGCGGGGCTTTTGTCTTGTTCTACGGAGGCTATGATTGTAGACACTGAAACTGGTCAACCACTTCAGATTAACCAAACTGGAGAGCTTTGGCTAAGAGGTCCTACAATCATGAAAGGATATTTCAACAACGAGGAGGCCACTAAATCAACACTTACTTCAGATGGTTGGTTAAGAACCGGGGACGTTTGCTATTTTGATCGCGACGGGTTCTTATTTGTTGTTGATCGGTTGAAAGAGTTGATTAAATACAAAGGATATCAGGTCCCTCCAGCAGAATTAGAGGCTGTGTTACTAACTCATCCTTCGATTCTAGATGCTGCTGTTATACCGTATCCAGATGAGGAGGCTGGACAATATCCAATGGCATATGTGGTAAGGAAGCATGGAAGTAACATATCAGACGGCCAAATTATGGAATTTGTTGCGGGACAGGTGGCTCCATATAAAAAAGTTCGAAAAGTGGCATTCATATCTTCTATACCCAAAAATCCATCTGGCAAAATTCTTCGCAATGATCTCATCAAGCTGGCTACATCTAAGCTTTAA 1659 0.443 MELQGGRIDSRSGFCSSNSIFYSKRQPISLPPNHSLDATTFISSHAHHGHTAYIDASTGRHLTYTQLWRSVEAVTSSLSNMGIKKGDVILILSPNSIYFPVVCLSVMSLGAIITTTNPLNTTSEIAKQIADSKPVLAFTISSLVSKINAASPTLPIILMDVNGESSSSSSSSSSNSITLEEMMKKELELTSVRERINKDDTATLLYSSGTTGPSKGVVSSHKNLIAMVQNVLTRFSKQEETFICTVPMFHIYGLGVFATGLLALGSTIVILSKFEMDHMLSSIERYRVNVLPLVPPIFVVMLNNADAIKRKHDLSSLHTVLCGGAPLSKEVIEGFIEKYRNVVIRQGYGLTESSGIGSSTDCLEETRKYGTAGLLSCSTEAMIVDTETGQPLQINQTGELWLRGPTIMKGYFNNEEATKSTLTSDGWLRTGDVCYFDRDGFLFVVDRLKELIKYKGYQVPPAELEAVLLTHPSILDAAVIPYPDEEAGQYPMAYVVRKHGSNISDGQIMEFVAGQVAPYKKVRKVAFISSIPKNPSGKILRNDLIKLATSKL* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3380 552 Pfam AMP-binding enzyme C-terminal domain 463 538 IPR025110 -
Psa4g3380 552 SUPERFAMILY Acetyl-CoA synthetase-like 41 550 - -
Psa4g3380 552 Gene3D - 18 449 IPR042099 -
Psa4g3380 552 PANTHER BNAA06G14440D PROTEIN 8 551 - -
Psa4g3380 552 Pfam AMP-binding enzyme 46 454 IPR000873 -
Psa4g3380 552 CDD 4CL 30 544 - -
Psa4g3380 552 ProSitePatterns Putative AMP-binding domain signature. 204 215 IPR020845 -
Psa4g3380 552 Gene3D - 450 551 IPR045851 -
Psa4g3380 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3380 Psa-Chr4 287276181 287280299 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3380 8 552 Monolignol Biosynthesis Gene Families AT1G20500 62.821 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3380 K10526 - gmx:100811344 813.527