Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3376 ATGAGGCTATGTAGGACTGTTGTTAAAGAAGCATGGGAGAAAACATTCTTATTTACAAAGTTCTTATGCTTTTTATATCTTACCGACAACTATCTGGTTGACCCTGTTAAGATCTACAGTCCTAGCATGCTTCCTGTAATCGATTTGAATCCAAGCATCTTTCTTGCTGAAAGGATAACACCTCGATCTGGTAAAATTACTCACAGAGATATCATAGTCTTCCTCTCACCTCAAAACCCTAGAAGGACTGTCACAAAGCGGGAAAAGGATTGTCTCGAATTTGCTTTCTCTGATTTTAATTTTGGGGCTTATTTAACTAGTAGTTTGAAGTTACTTCTTGTTAAAGGTGATAACAAATATAATAGCATCGATTCTAGACATTTTGGTCCAATTCCTTATGGCCTTATTGAGAGTAAGATATTCTGGAAGGTATTTTCACTTGAAGATTTTGGAAAAACTAGAAAGCATCTCTCTATTATACAACCACAGGTTTCCTGA 498 0.3594 MRLCRTVVKEAWEKTFLFTKFLCFLYLTDNYLVDPVKIYSPSMLPVIDLNPSIFLAERITPRSGKITHRDIIVFLSPQNPRRTVTKREKDCLEFAFSDFNFGAYLTSSLKLLLVKGDNKYNSIDSRHFGPIPYGLIESKIFWKVFSLEDFGKTRKHLSIIQPQVS* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3376 165 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 5 155 - -
Psa4g3376 165 Gene3D Umud Fragment, subunit A 29 159 - -
Psa4g3376 165 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 5 155 - -
Psa4g3376 165 CDD S26_SPase_I 35 140 IPR019533 GO:0004252|GO:0006465
Psa4g3376 165 SUPERFAMILY LexA/Signal peptidase 31 153 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3376 Psa-Chr4 287189703 287190852 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3376 43 151 MADS-box Gene Family AT1G29960 38.261 3.01e-22 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3376 K09647 - dcr:108223440 125.946