Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3350 ATGTCTATCGGTAGTGATGATCGATTGATAGCACTCTTAGTTCTGTTACTGATACCAACAGTTCTTGGTTGGGGAAAAGAGGGACACTATGTGGTTTGTAAAATTACACAGGAGTATCTTAGTGAAGATGCTCTTTTTGCAGTGAAACAACTGCTTCCAGATTCTGCTCATGGCGATCTTGCTGCACTTTGCTCTTGGCCTGATGAAATTCACTTCCATTATCATTGGAGTAGTGCTTTGCATTATGCTGATACACCTGATTTCTTGTGTAATTATCAATACTGCAGAGGTTGTCATGATTCTTATGGACGGAAGCATAGAGGCACTTTTGTTCTTGTCACATTTTGTTGGGGATGTACATCAGCCCCTACATGTTGGTTTTACCGAAGACCTAGGTGGAAACTCGATAACAGTTCGTTGAAAACCAACACCCTGCCAAAGAAAAAACTGCAGTATATAAAGCAAGGTGGGATTAAGAGTATGCACACGGAAGCATATACTGGTCAGCTAAAAGTCGAATCCTTTGTTGCTGCTTGTCGCTCGATCAATTCATCCCTTGAAGTTGTGGAACATGAAGAAGCTTTGCAGAATTCCAATGCTCTGGAAATTTTCAGCAAATACGATATAATAATGGATGCAACACAATGCATCAAAGTTGTTGCCATCTCAGTCGCAGTAGTCCCAAGCACAGGCTTCACCGCAACAATTAATGTCGCAGATTCACAATCAGCTTGCACTGATGCAACAACAGCCAAGTTCTTTGCAAAAATTGCAATGAGATATGCAGCAAAATCTCCAAGCATCAGGGTCCTTACATCAACAGACAAAAATCATGGGCAATATAATCAGAAGGAAAATGGTTCATGCATTGTCTGCAGCAAGATAGTATAA 891 0.4085 MSIGSDDRLIALLVLLLIPTVLGWGKEGHYVVCKITQEYLSEDALFAVKQLLPDSAHGDLAALCSWPDEIHFHYHWSSALHYADTPDFLCNYQYCRGCHDSYGRKHRGTFVLVTFCWGCTSAPTCWFYRRPRWKLDNSSLKTNTLPKKKLQYIKQGGIKSMHTEAYTGQLKVESFVAACRSINSSLEVVEHEEALQNSNALEIFSKYDIIMDATQCIKVVAISVAVVPSTGFTATINVADSQSACTDATTAKFFAKIAMRYAAKSPSIRVLTSTDKNHGQYNQKENGSCIVCSKIV* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3350 296 SUPERFAMILY Phospholipase C/P1 nuclease 17 96 IPR008947 GO:0016788
Psa4g3350 296 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 162 249 IPR035985 GO:0008641
Psa4g3350 296 PANTHER ENDONUCLEASE 4 9 107 IPR003154 GO:0003676|GO:0004519|GO:0006308
Psa4g3350 296 Pfam S1/P1 Nuclease 24 104 IPR003154 GO:0003676|GO:0004519|GO:0006308
Psa4g3350 296 Gene3D P1 Nuclease 24 114 IPR008947 GO:0016788
Psa4g3350 296 Gene3D - 160 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3350 Psa-Chr4 284938134 284939275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3350 161 214 Sulfurtransferasese or Rhodanese AT5G55130 64.815 6.65e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3350 K05986 - gmx:100797334 166.777