Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3349 ATGAATTCAGTCCAAGTTCTTTCAACCACCATAATTCATGCACCAAATCACAATATTTATGGCTCAAAAGTTCGTACAATCGATCTTACTCCATGGGATTTACAATACCTCCCATTTGGATACAGTCAAATCGGTCTTCTTTATCACCACACTTCTCAACTAGATACAAAGTGTCAAATCCAACACCTTAAACAATCTCTCACCTATGCTCTTGAGTTTTTTCCACCTTTTACCGATCGTCTCAATATCACAGAACATGAAGATAACACTATCTCTTGTTCCATCAACTGCAACAACCAAGGTGCACTCTTTGTCCATGCTGCAACGGAAAATATTAGTGTCGACAACATCCTTCAACCCACTTATCTTCCTTCTATTTTTTATTCATTTTTCCCACTTAACAAATTTAAAAACTATCACGGGTCGGCACAACCATTACTTGCGGTCCAAGTCACAGAGTTAGCCGATGGCATCGTTATTGCCTGCTCAATCAACCATGTGGTAGTCGATGGTACTTTGGTTTGGCATTTCATCAATTCATGGGCCAAAATCTCAAAAGGTAATTTTGAAATTTCCAAAGTTCCATCATTCGAACGATGGTTTCCGAATAGTATTCAACGTCCTATTCGATTTCATTTTCCATTAGAATCACGAGATAGTCTCTTTAATGATCAAAATGATGTAGAAGAAAAACTCCACGTGTCGAAGTCGGAGAGATTCTTTCATTTATCAAAAGAGAATATTGCAAAACTAAAATCCAAAGCCAATTTAGAGGCCGGTACAAAGAACATATCTTCTTTGCAAGCGGTTTTCACTCACGTTTGGCGCTCTGTTACCCGTTCCAAAAACCTTGACCCACAAACAGAAGTGAGCTTTGTGATGGATATAGGCGTTAGACCAAGGTTTATTCCTCCGTTGCAAAAGGATTATTTTGGTAATGCTGTGATAAAGTGTGTGGTTACCATAAAAGCTGGTGAATTGTTGGAAGATGGAGGGCTTGGTAGAGGTGCTTGGGAGATTAACAAGAAAATTGCTTTACACAATGATGACATGTTGAAAAATCAGTATGAAAAATGGTTAATAACGCCAAGTTTTGTTTTTACACGTGATGATAATTCATTGGTGATTGGCAGTTCACCTCGGTTTGATGTTTATGGGAATGATTTTGGTTGGGGAAAACCTGTGGGGGTGCGAATAAAAGAAATGGGAAGATTTTTGTGCGTGCAGGTGTTCAAGAAGGTAGTATGA 1248 0.3862 MNSVQVLSTTIIHAPNHNIYGSKVRTIDLTPWDLQYLPFGYSQIGLLYHHTSQLDTKCQIQHLKQSLTYALEFFPPFTDRLNITEHEDNTISCSINCNNQGALFVHAATENISVDNILQPTYLPSIFYSFFPLNKFKNYHGSAQPLLAVQVTELADGIVIACSINHVVVDGTLVWHFINSWAKISKGNFEISKVPSFERWFPNSIQRPIRFHFPLESRDSLFNDQNDVEEKLHVSKSERFFHLSKENIAKLKSKANLEAGTKNISSLQAVFTHVWRSVTRSKNLDPQTEVSFVMDIGVRPRFIPPLQKDYFGNAVIKCVVTIKAGELLEDGGLGRGAWEINKKIALHNDDMLKNQYEKWLITPSFVFTRDDNSLVIGSSPRFDVYGNDFGWGKPVGVRIKEMGRFLCVQVFKKVV* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3349 415 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 398 - -
Psa4g3349 415 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 398 - -
Psa4g3349 415 Gene3D - 235 413 IPR023213 -
Psa4g3349 415 Gene3D - 2 209 IPR023213 -
Psa4g3349 415 Pfam Transferase family 4 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3349 Psa-Chr4 284910274 284911861 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3349 61 395 Monolignol Biosynthesis Gene Families AT5G48930 26.761 1.47e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3349 - - gmx:100500257 407.142