Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3339 ATGGAGGGTCATGATTTCAAGAAATCTAACTGCAACAGGAAACTGATAGGTGCGAGATACTATAATACACAAGATACTTTAAATAGCAACAAGACTCGTACTGAAGGAGCCAAAGGTTCACCGAGAGATTCCATTGGACATGGAACTCACACTGCGTCAACCGCAGCGGGTGTATTCGTAAACAATGCTAGTTATTATGGTTTAGCAAAAGGAACGGCGAGAGGTGGTTCACCTTCTACTAGAATTGCAGCTTATAAAACATGTTCAGAAGAAGGTTGTTCGGGTTCGACGATACTAAAAGCTATGGACGATGCTATCAGGGATGGAGTAGATATAATCTCGATCTCTATTGGACTTAGCTCGCTAATGCAGTCTGATTATTTGAATGATCCAATAGCCATTGGAGCTTTTCATGCTGAAGAAAGAGGGGTTATGGTGGTGTGTTCGGCTGGGAATGATGGTCCTGATCCTTACACTGTTGTGAACACAGCACCGTGGATATTTACAGTTTCGGCTTCTAATATTGATAGGAACTTTCGGTCGGCCGTTGTCCTTGGAAATGGGAAAACTTTCCAAGGCGCTGGCATTAACTTCTCAAACCTTACTCGCTCAACAATGTATTCTCTTGTCTTTGGAGAGGAAATTGCTGCCAAATTCGCGCCAACATCAGAAGCTAGGAACTGTTATCCTGGTTCACTAGACTATACCAAAGTAGCAGGCAAAATTGTTGTTTGTGTTAACGATGATCCGAATATTTCAAGGCGAATCAAGAAGCTAGTTTTACAAGATGCAAGAGCCATGGGGATGATACTCGTCGACGAGAACAATAGAGATGTTTCCTTTGATGCAGGTGCATTTCCCTTCACAGAGATTGGAAATCTTGAATGGCATCAGATCCTTCACTACATAAACTCTACCAAGAATCCAACTGCAACAATTCTTCCAACAATCGAAGTTCCTAGATATAGACCTGCACCAATCGTTGCGTCCTTTTCATCCAGAGGTCCTTCTAGCCTTACAGAGAACATTCTCAAGCCTGATGTCATGGCTCCAGGAGTTGCCATTTTGGGTGCCATGGTTCCCAAAAGTGATGAGCCAGGAAGTGTTCCAATTGGAGAAAAGCCATCCTTATTTGGCATAAAATCCGGTACATCTATGGCTTGCCCTCATGTGACAGGTGCTGCAGCATTCATCAAATCAGTACATGGAAGATGGAGTCCTTCAATGATCAAATCAGCATTAATGACAACAGCTACAACCTACAATAGCATGAAGAAGCCGGTGACCAACAGCTCAAACTACATCGCCAACCCACACGAAATGGGAGTTGGAGAAATCAATCCACTCAAGGCTCTCAACCCTGGTTTAGTCTTCGAAACAAATATCAAAGACTACATCAAATTCCTTTGTTATTATGGCTACTCAAAGAAAATCATAAGCTCAGTATCTAAAACCAATGTAACTTGCCCAAAAACCTCTCAAGATCTTATATCCAACATCAATTACCCATCAATCTCTATACAAACACTTAAAAGAAATCAAAAAGTAAAAATGATCACAAGAACAGTCACCAATGTGGGAGCCTCTAATGCCACATACGTTGCAAAGGTGCATGCACCTGAAGGAATGGTCGTTAATGTCTACCCCAACAAACTTGTGTTTTCAAAGAATGTTAAAAGAATTACCTATAAAGTGTCATTCTATGCCAAGGAAGCTCATGGTGGATACAATTTTGGGTCTCTAACATGGCTTGATGGTCGACACTATGTTCATACAGTATTTGCAGTCAAAGTTCAATAA 1800 0.415 MEGHDFKKSNCNRKLIGARYYNTQDTLNSNKTRTEGAKGSPRDSIGHGTHTASTAAGVFVNNASYYGLAKGTARGGSPSTRIAAYKTCSEEGCSGSTILKAMDDAIRDGVDIISISIGLSSLMQSDYLNDPIAIGAFHAEERGVMVVCSAGNDGPDPYTVVNTAPWIFTVSASNIDRNFRSAVVLGNGKTFQGAGINFSNLTRSTMYSLVFGEEIAAKFAPTSEARNCYPGSLDYTKVAGKIVVCVNDDPNISRRIKKLVLQDARAMGMILVDENNRDVSFDAGAFPFTEIGNLEWHQILHYINSTKNPTATILPTIEVPRYRPAPIVASFSSRGPSSLTENILKPDVMAPGVAILGAMVPKSDEPGSVPIGEKPSLFGIKSGTSMACPHVTGAAAFIKSVHGRWSPSMIKSALMTTATTYNSMKKPVTNSSNYIANPHEMGVGEINPLKALNPGLVFETNIKDYIKFLCYYGYSKKIISSVSKTNVTCPKTSQDLISNINYPSISIQTLKRNQKVKMITRTVTNVGASNATYVAKVHAPEGMVVNVYPNKLVFSKNVKRITYKVSFYAKEAHGGYNFGSLTWLDGRHYVHTVFAVKVQ* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3339 599 Gene3D Peptidase S8/S53 domain 7 465 IPR036852 GO:0004252|GO:0006508
Psa4g3339 599 ProSiteProfiles Serine proteases, subtilase domain profile. 1 452 - -
Psa4g3339 599 CDD PA_subtilisin_like 183 313 - -
Psa4g3339 599 MobiDBLite consensus disorder prediction 26 48 - -
Psa4g3339 599 Pfam Subtilase family 29 422 IPR000209 GO:0006508|GO:0008236
Psa4g3339 599 ProSitePatterns Serine proteases, subtilase family, serine active site. 383 393 IPR023828 -
Psa4g3339 599 Gene3D - 176 320 - -
Psa4g3339 599 Pfam Fibronectin type-III domain 499 596 IPR041469 -
Psa4g3339 599 SUPERFAMILY Subtilisin-like 9 456 IPR036852 GO:0004252|GO:0006508
Psa4g3339 599 PANTHER CUCUMISIN-LIKE 8 596 - -
Psa4g3339 599 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 596 IPR045051 -
Psa4g3339 599 PRINTS Subtilisin serine protease family (S8) signature 43 56 IPR015500 -
Psa4g3339 599 PRINTS Subtilisin serine protease family (S8) signature 382 398 IPR015500 -
Psa4g3339 599 Gene3D - 469 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3339 Psa-Chr4 284114500 284118090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3339 11 596 Subtilisin-like Serine Gene Family AT1G20150 44.983 6.64e-163 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3339 K25898 - gmx:100809885 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3339 4 284114500 284118090 Psa4g3339 4 284114500 284118090 ECH