Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3323 ATGAAGAAAAATTTGCTTACAGGTAACTTGCCGAATTCGGTGAATGATCTTGTTACTCTTAGAGTTTTGGATCTGTCAAATAATCAACTATTTGGTGAATTACCTCATCTTCATAATTTGGTTAACCTTCAAGTTCTTCACTTGGAAAACAACACATTAGGACCTCATTTTCCTTCTCTTCCTACAAAGTTAGTTTCAATTGTGCTTAGAAACAACAGTTTTAAGCTTGGTGTACCTTCTAATATAACTTCTTTCTATCAACTTCAAAAATTGGACCTTTCATTCAATGGCTTTGTAGGGCCATTTCCACCATCTTTGCTGTCACTTCCTTCAATAAATTACCTTGATGTTTCTTCAAATAAGTTCACTGGTATGCTTTTCAAGAATTTTTCGTGCAACGAAGATCTTCAGTTTGTGAATTTGTCTTCAAATCTTTTGAAAGGTGAACTACCTAGCTGTTTGAGACAACAAACAAAGGTTGTTTTGTATGCTAGAAACTGTTTATCAAATGAGAAGAAACAAGATCAACATAGTTACAATTTCTGCAGCAGTGAAGCTCTCGCGGTGAATATTTCACCGCGTCAACAACAGAAACATAAAGGAACAACAAGCAAAGCACTACTTGTCTCATCAAGTATTGGAGTTGTTGGAGTATTGATTGTTGCAGTTGTTATCTTGGTTGTTAATCAAGTTCATAAAAAAAATGTTTCGAAAACACCTTCAATGTCTACTTTGGAGCATGTTATTATTAGTCAAATACAGAATGAAGATAGAGTGAAAACTACTGCAAGGTCTATAGTAGAGCATATCATCAAAAGAGTTCCTGATAAAAATGCTATGAAAACACTAACAAGATCCATAAAGGAACATATAGCGAGCTTACTCGGTACCAGACGCCTTTCGAGGTCACCTTCAAGGTCCATAATAGAACATGTATCATCAGTAAACACTGCAAAACTACTCACAGATGCAAGGTGTATATCTGAAACAATGAAGATGGGAACTGGTCTTCCTGCATATAGGACCTTTTCTTTGGACCAACTTAAGGAAGCTACAAATAATTTTGATGAGTCAAGTCTCATAAGTGAAGGTCCACTTGGTCAGATATATAAAGGGGTTCTCTCTGATGGGATGCATATTACAATTAGAGGAATGAAGATAAGAAAGAAGCACAGCCCTCAAGCCTATATGCACCATGTTGAGTTGATTTCAAAACTTAGGCATTCACACTTGGTTAGTTCACTTGGACATTCTTTTGAGTGCAACCAAGATGATTCAAGTGTCAATACTATATTTCTCATTTTCGAGTTTGTTCAAGACAAAAGTTTAAGAAGCCGCATCTCTGGATCAAATGGAGAAAAGCTTTGTTGGACACAGAGAATAGCAGCCACAATTGGAGTAGTGAAAGGCATTCAATATTTGCATACAGGGATAGTGCCTGGACTATATTCAAATAATATCAAGATAACTGATATTCTTTTGGATAACAATCATAATGTTAAGATAAGCAGTTATAATCTGCCGATCTATGCTGAAAACAGAAGAATGGTCAGCAATGGAACTTCTCATGGAGTAAAAGGAAACCTCCACGCAAGGACAAATGATGGAGACAAGAATGATGTGTATGATATTGGCGTAATCTTGCTAGAAATCATTCTTGGACGACCAATAATGTTCCACAATGAAGTGGGAACATTAAAAGATCTCTTACATGTAAGCATAAAAACTGATGATATAGCAAGAAGGAGTATTGTAGACCCATTTGTTCACAAGGAATGTTCAGATGAATCATTAATGAAAATGATGGAGATATGTGTAAGGTGTCTCTCTAGTGAACCAAATGAAAGACCTTCAGTAGAAGATGTTCTTTGGAATTTGCAGTTTGCAGCACAAGTTCAGAATTCATGGAGAAGAGAAACAAGCGATTATAGAGACTCACCTATATCTTCCTCAAGAGAGACAAAGTTACTATGA 1974 0.3602 MKKNLLTGNLPNSVNDLVTLRVLDLSNNQLFGELPHLHNLVNLQVLHLENNTLGPHFPSLPTKLVSIVLRNNSFKLGVPSNITSFYQLQKLDLSFNGFVGPFPPSLLSLPSINYLDVSSNKFTGMLFKNFSCNEDLQFVNLSSNLLKGELPSCLRQQTKVVLYARNCLSNEKKQDQHSYNFCSSEALAVNISPRQQQKHKGTTSKALLVSSSIGVVGVLIVAVVILVVNQVHKKNVSKTPSMSTLEHVIISQIQNEDRVKTTARSIVEHIIKRVPDKNAMKTLTRSIKEHIASLLGTRRLSRSPSRSIIEHVSSVNTAKLLTDARCISETMKMGTGLPAYRTFSLDQLKEATNNFDESSLISEGPLGQIYKGVLSDGMHITIRGMKIRKKHSPQAYMHHVELISKLRHSHLVSSLGHSFECNQDDSSVNTIFLIFEFVQDKSLRSRISGSNGEKLCWTQRIAATIGVVKGIQYLHTGIVPGLYSNNIKITDILLDNNHNVKISSYNLPIYAENRRMVSNGTSHGVKGNLHARTNDGDKNDVYDIGVILLEIILGRPIMFHNEVGTLKDLLHVSIKTDDIARRSIVDPFVHKECSDESLMKMMEICVRCLSSEPNERPSVEDVLWNLQFAAQVQNSWRRETSDYRDSPISSSRETKLL* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3323 657 SUPERFAMILY L domain-like 4 157 - -
Psa4g3323 657 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 297 643 - -
Psa4g3323 657 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 248 - -
Psa4g3323 657 Gene3D Ribonuclease Inhibitor 1 200 IPR032675 -
Psa4g3323 657 SUPERFAMILY Protein kinase-like (PK-like) 334 628 IPR011009 -
Psa4g3323 657 Pfam Protein kinase domain 357 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3323 657 ProSiteProfiles Protein kinase domain profile. 355 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3323 657 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 297 643 - -
Psa4g3323 657 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 2 248 - -
Psa4g3323 657 ProSiteProfiles Leucine-rich repeat profile. 19 41 IPR001611 GO:0005515
Psa4g3323 657 Gene3D Phosphorylase Kinase; domain 1 317 437 - -
Psa4g3323 657 Gene3D Transferase(Phosphotransferase) domain 1 439 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3323 Psa-Chr4 281408096 281414331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3323 1 636 Miscellaneous Gene Families AT3G03770 42.470 7.04e-157 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Psa4g3323 Pkinase 7.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3323 - - gmx:100785707 959.133