Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3314 ATGCTTTTGCTTCGGGATCATCTAGGGTGTCTAAGCTCTCACAAAGAGTTGCAATTATGGACTCATATGTGTTGGGCTGCTCTCTCTAATTTGATGGCACGAACCACCAACAAGAACAACATCATGGATGCTTCGGTTATTGCCCACTGTTCTACAATCACAGAATCAGAAATCAAAGGGGAAGATACTGATCTGGCATCAAAGTGTGCCCTCGATGACTTACAGGAGCTTTCTGCTCGAAATCCTTCCAATCATTGTCACATTGCTTCTGTTTCAGAGCTCAATGCACCCGAGTCCCATGGAACTGAGGAATCAACGGTTACAGTGGAGTATCTAGGTCCATTCGAAGGTTCTGAACCAACCGTAACTTTATTGAGGAAATCGTTTCCTGACAGAAAGGATATTCGCATACGACCTGTTAGCAAGCGTACTGAAAAAACTCCAAAGAGCAGACCAAAGAGTGTAGGAACTATGTCAAAATCTGAGTTGAGACCTTTGGGAACTGGATTGTTTCCTGTTGTTTCCATTATCAATCACAGCCACTCATTTCTGTTTCGATTTTTGTCATCCGCTCTAACTGCGACCATGGCTGATGAATTGATTCTTCTAGATTACTGGCCAAGTCCGTTCGGGATGAGGCTCAGAATAGCCCTTGTTGAAAAGGTTCAGATGAAAGAAGCTGAAGTGAAAGAGAAAAGGCCACTTAAAGGGAGAAAATTAAGAGACAGATCTAAGATAAATGTCAGGACATTTAGCTCTATGCTTTCAGCTAGAAGCAAGGCTGCTGGTAGAAGTGTGCCAAATGATTTGGTAATGAGCATTGATGCAACTGACAAAGACAATGAATTGGCTGGAACTGAGTATATTGATGATATTTACAAGTTTTACAAACACAGTGAAGGTGACTGTCCTCTACATGATTACATGGTTTCACAGCCGGATATAAATGCTAAGATGAGAGCGATTCTTATTGACTGGTTGATTGAAGTTCATCGAAAATTCGAAATCATGCCAGAAATTTTCTATCTGACTCTTAACATAGTTGACCGATTCTTGTCCATGAAGGTTGTTCCTAGAAAGGAACTTCAACTTGTTGGCATAAGCTCAATGCTTATTACATCTAAGTATGAAGAGATATGGGCACCAGAGGTTACAAATTTTGTATGCATATCAGACAATGCCTATGTTAGAGAACAGGTTTTGGTTATGGAGAAAACAATCCTGGGAAACCTGGAATGGTATTTAACAGTTCCTACTCCTTATGTCTTTCTGGTTCGGTACATCAAAGCCTTCACTCCCTCTGATGAACAGATGGAAAATATGGTGAATTTCCTAGCTGAACTTTCTATGATGCATTATGTTGTTGTATCATCGTATAGTCCTTCGATGATTGATGCTTCTGCTGTTTATGCGGCAAGATGCACCACTCAATCCAGAAATATTGAGGCGGGAGGAGGCACTCTTCCCGATCTATCATCGAGCCGTGACGCGATTCCTGAAGACAGGCGAATAACTGGTGCAATTCGAGCGATTGCGCACCACCCCTATGCAAAAGACATTTTGATGTTTGGTGTTGGTCTTGTTCCTGACGTGCCTGTTGGTGCCGTTGCAGTTACGGCTCGACGATATGATGCAGTTGTCACTGCTTTGCTTTGTAATTCTCCTGCAAGTATCAGCAACAATTGA 1686 0.4205 MLLLRDHLGCLSSHKELQLWTHMCWAALSNLMARTTNKNNIMDASVIAHCSTITESEIKGEDTDLASKCALDDLQELSARNPSNHCHIASVSELNAPESHGTEESTVTVEYLGPFEGSEPTVTLLRKSFPDRKDIRIRPVSKRTEKTPKSRPKSVGTMSKSELRPLGTGLFPVVSIINHSHSFLFRFLSSALTATMADELILLDYWPSPFGMRLRIALVEKVQMKEAEVKEKRPLKGRKLRDRSKINVRTFSSMLSARSKAAGRSVPNDLVMSIDATDKDNELAGTEYIDDIYKFYKHSEGDCPLHDYMVSQPDINAKMRAILIDWLIEVHRKFEIMPEIFYLTLNIVDRFLSMKVVPRKELQLVGISSMLITSKYEEIWAPEVTNFVCISDNAYVREQVLVMEKTILGNLEWYLTVPTPYVFLVRYIKAFTPSDEQMENMVNFLAELSMMHYVVVSSYSPSMIDASAVYAARCTTQSRNIEAGGGTLPDLSSSRDAIPEDRRITGAIRAIAHHPYAKDILMFGVGLVPDVPVGAVAVTARRYDAVVTALLCNSPASISNN* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3314 561 ProSitePatterns Cyclins signature. 320 351 IPR006671 -
Psa4g3314 561 MobiDBLite consensus disorder prediction 139 159 - -
Psa4g3314 561 Gene3D - 306 409 - -
Psa4g3314 561 SUPERFAMILY Cyclin-like 280 415 IPR036915 -
Psa4g3314 561 CDD CYCLIN 319 408 IPR013763 -
Psa4g3314 561 Pfam Cyclin, C-terminal domain 418 480 IPR004367 -
Psa4g3314 561 PANTHER CYCLIN-B1-4 231 477 - -
Psa4g3314 561 SUPERFAMILY Cyclin-like 419 478 IPR036915 -
Psa4g3314 561 SMART Cyclin_C_2 418 531 IPR004367 -
Psa4g3314 561 Pfam Cyclin, N-terminal domain 291 415 IPR006671 -
Psa4g3314 561 CDD CYCLIN 416 477 IPR013763 -
Psa4g3314 561 PANTHER CYCLINS 231 477 IPR039361 -
Psa4g3314 561 SMART cyclin_7 325 409 IPR013763 -
Psa4g3314 561 SMART cyclin_7 422 513 IPR013763 -
Psa4g3314 561 Gene3D - 410 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3314 Psa-Chr4 281094790 281097418 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3314 249 473 Core Cell Cycle Gene Families AT2G26760 62.667 2.36e-98 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3314 K21777 - gmx:547782 358.607