Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3310 ATGCTTACTAATGGTTGGAGCACATTTGTAAACTCAAAAAATCTTGCTCCCGGAGATTCATGCATTTTTGTTAGTGGTGAGAATGGTGAATTTGGTATTGGGATTCGTCGAGATATGAAACAACATATCAATGTATGCTGCACATCATCGTCTCAACAGTCTAGTCAAAATATGCAACTTCCATCATTGGTTGCTGCTCTTCATGCTGTTTGTATTGGAACTTTGTTCCATGTTCAGTACTACCCTTGGATTACTCCTTTTGAATTTATAATTCCTCTGAAAACTTATGTTGAGTCAATTGAAAAAGATTACTCAATTGGAACAAGGGTGCACATGTTGTCTCAAGTTGAAGGATGTATAAAAAGGTATGGTACAATAGTTGGTAATGAAGATATTGATCCTATTAACTGGCCTGCTTCTGATTGGAGATCTCTTAGGGTTCAATGGGATTCTATTCCAAATATTTTTACACATCTGGAAAGAGTTTGTCCTTGGTGGATTGAGCCCTTGAAAGATTCCAAGATTAAGGGAATCCATGTTCTTCCTTTACCTAAAAAAATAGATGAATATGACTCATTATTGCATGGATTAAGTGACTTTGGACTCAAGGGTTAG 615 0.3642 MLTNGWSTFVNSKNLAPGDSCIFVSGENGEFGIGIRRDMKQHINVCCTSSSQQSSQNMQLPSLVAALHAVCIGTLFHVQYYPWITPFEFIIPLKTYVESIEKDYSIGTRVHMLSQVEGCIKRYGTIVGNEDIDPINWPASDWRSLRVQWDSIPNIFTHLERVCPWWIEPLKDSKIKGIHVLPLPKKIDEYDSLLHGLSDFGLKG* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3310 204 Pfam Auxin response factor 66 145 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Psa4g3310 204 SUPERFAMILY DNA-binding pseudobarrel domain 1 37 IPR015300 -
Psa4g3310 204 ProSiteProfiles B3 DNA-binding domain profile. 1 39 IPR003340 GO:0003677
Psa4g3310 204 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 174 IPR044835 GO:0003677|GO:0006355|GO:0009725
Psa4g3310 204 Gene3D - 1 39 IPR015300 -
Psa4g3310 204 PANTHER AUXIN RESPONSE FACTOR 1 174 - -
Psa4g3310 204 Gene3D - 103 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3310 Psa-Chr4 280844563 280846062 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3310 1 186 B3 DNA Binding Superfamily AT5G62000 44.681 8.27e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3310 - - mtr:MTR_8g446900 296.204