Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3309 ATGGAAGATTTGATGCGTTTGATGAGTCTTGATCGGTGGTTGCACAAAAAGAATAAGACATCGGTTGCGTTCAGTACGGTTCATCATGACATCATTGATTGGCCGAAAAGATTGCATACAACCATTAGAGCTGCACAAGTTGTTGATTTCGGTCTCGCCAGGATACTGATTAAGCCGGAAGAACTTGCCACCATGCCAGCTGTGGCTGGCGCATTTGGATATATTGGTCCAGAATATGCTCAAACAATTAGAGTCAATGAGAAGATAGATGTTTACAGCTTTGGAGTAGTTCTATTGGAACTGACAACTGGAAACGAAACTAATCTAAAAACTGCCAGCCGGTAG 345 0.4261 MEDLMRLMSLDRWLHKKNKTSVAFSTVHHDIIDWPKRLHTTIRAAQVVDFGLARILIKPEELATMPAVAGAFGYIGPEYAQTIRVNEKIDVYSFGVVLLELTTGNETNLKTASR* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3309 114 SUPERFAMILY Protein kinase-like (PK-like) 3 104 IPR011009 -
Psa4g3309 114 Gene3D Transferase(Phosphotransferase) domain 1 5 112 - -
Psa4g3309 114 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 45 109 - -
Psa4g3309 114 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 5 46 - -
Psa4g3309 114 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 5 46 - -
Psa4g3309 114 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 45 109 - -
Psa4g3309 114 Pfam Protein kinase domain 45 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3309 114 ProSiteProfiles Protein kinase domain profile. 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3309 Psa-Chr4 280775677 280776454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3309 9 108 Receptor kinase-like Gene Family AT5G25930 45.113 2.23e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa4g3309 Pkinase 2.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3309 - K00924 gmx:100798963 129.028