Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3295 ATGAAAGTTTCAGAGATTCTAGGAAGAGGTGGATTTTCTGTTGTTAGAAAAGACACAAATGGTGTTCATCTTGTGCTTGAGCTTTGTTCTGGGTGCGAACTTTTCGATAGGATTGTTGCACAAGATAAGTATCCACCTTTCATTGCTCAAAATAATCGCCAAAAGCAACAAATGATATTGAATGGAAATTTTAGTTTTTATGAGAAGACTTGGAAGGGAATTTCACAATCAGCAAAGAATTTGATTTCAAGTCTTCTAACTGTTGATCCTGCTAAAAGACCTAGTGCTCAAGAGCTTTTAAGTGATCCATGGGTTAAAGTGAGAAGCCAAAATGATCAAATGGACCCTGAAATGTGTCAAGGCTACAAAGATTCAATGCAAGACGCAAACTTCGCGCAGCTGCAATTGCTAGTGTTTGGAGCTCCACAATTTTTCTAA 438 0.3767 MKVSEILGRGGFSVVRKDTNGVHLVLELCSGCELFDRIVAQDKYPPFIAQNNRQKQQMILNGNFSFYEKTWKGISQSAKNLISSLLTVDPAKRPSAQELLSDPWVKVRSQNDQMDPEMCQGYKDSMQDANFAQLQLLVFGAPQFF* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3295 145 PANTHER SERINE/THREONINE-PROTEIN KINASE 44 121 - -
Psa4g3295 145 PANTHER CALCIUM AND CALCIUM/CALMODULIN-DEPENDENT SERINE/THREONINE-PROTEIN KINASE 44 121 - -
Psa4g3295 145 ProSiteProfiles Protein kinase domain profile. 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3295 145 Gene3D Transferase(Phosphotransferase) domain 1 23 137 - -
Psa4g3295 145 SMART serkin_6 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3295 145 Pfam Protein kinase domain 24 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3295 145 SUPERFAMILY Protein kinase-like (PK-like) 4 108 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3295 Psa-Chr4 279397117 279398466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3295 17 44 EF-hand Containing Proteins AT4G04720 60.714 6.15e-06 42.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-DCAMKL Psa4g3295 Pkinase 8.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3295 K13412 - gmx:100780887 122.479