Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3291 ATGGGGATCCAAACAATGGGGTCTCAAGGAGGTGGAGATGGTAGTGAAAAACGATCACAACTCCAACCTCTTGTGCGGCAAAATTCGGTATACAGTCTCACACTTGATGAGGTTGAAAATCAGTTAGGTGATTTAGGAAAGCCACTAAGTAGTATGAACCTAGACGAGCTTCTTAAAAATGTATGGACTGTTGAGGTGAACCAGTCCACGAGTTCGGACAATGAAGGCGCAGCACAAGCTAGTGAAGCTTCTCTACAACGTCAAGCTAGTCTGTCGTTAAAAGCTGCATTGAGCAAGAAGACTGTAGACGAGGTTTGGAGAGATATCCAACAAAAGAAAGACAGCGACGAGAAGAAGTCACGGGAGAGACAACCTACTTTAGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTATTGTTGCTGAAGCATCTTCTAATAAAACGAACACAGATACTACTGCTGGAATGGATTCAAATGTAGCAGTATCACAGTTTCCTACGCAAGGTCAGTGGATTCAGTATCCGCAATCACAACCACAATATCAGCAGCATCTACAACAAAGTTCAATGGGGGTTTATATGGCTAGCCAGGGTATAGCACAGCCGTTACACATGGGGGTTGGTGCTTCGATGGAGATTCCATTTGCAGATAGTCATATGGCACTGGCTGCACCTCTTATGGGAACTATGTCGGATACGCAGATTTCCGGAATGAAAAGGAACAATCCTGAGGGTATGGTGGAGAAAACTGTTGAGAGAAGGCAGAAAAGGATGATCAAGAATCGGGAATCCGCTGCCCGTTCAAGAGCAAGGAAACAGGCTTACACAAATGAATTGGAGAATAAAGTTTCGCGCCTGGAAGAGGAAAATCAAATGCTGAGGAAACGAAAGGAGCTAGAGAATATGTTGCCATGCGTACCAATTACTGAACCTAAATATCAGCTACGCCGAATAGCATCATCTCCATTCTGA 978 0.4438 MGIQTMGSQGGGDGSEKRSQLQPLVRQNSVYSLTLDEVENQLGDLGKPLSSMNLDELLKNVWTVEVNQSTSSDNEGAAQASEASLQRQASLSLKAALSKKTVDEVWRDIQQKKDSDEKKSRERQPTLGEMTLEDFLVKAGIVAEASSNKTNTDTTAGMDSNVAVSQFPTQGQWIQYPQSQPQYQQHLQQSSMGVYMASQGIAQPLHMGVGASMEIPFADSHMALAAPLMGTMSDTQISGMKRNNPEGMVEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENQMLRKRKELENMLPCVPITEPKYQLRRIASSPF* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3291 325 CDD bZIP_plant_BZIP46 255 301 - -
Psa4g3291 325 SMART brlzneu 251 323 IPR004827 GO:0003700|GO:0006355
Psa4g3291 325 Gene3D - 253 306 - -
Psa4g3291 325 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 3 323 IPR043452 GO:0003700|GO:0045893
Psa4g3291 325 SUPERFAMILY Leucine zipper domain 255 300 IPR046347 GO:0003700|GO:0006355
Psa4g3291 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 253 298 IPR004827 GO:0003700|GO:0006355
Psa4g3291 325 PANTHER CAMP RESPONSE ELEMENT BINDING (CREB) PROTEIN, BASIC-LEUCINE ZIPPER DOMAIN PROTEIN-RELATED 3 323 - -
Psa4g3291 325 Pfam bZIP transcription factor 255 299 IPR004827 GO:0003700|GO:0006355
Psa4g3291 325 MobiDBLite consensus disorder prediction 1 23 - -
Psa4g3291 325 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 258 273 IPR004827 GO:0003700|GO:0006355
Psa4g3291 325 Coils Coil 271 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3291 Psa-Chr4 279148002 279151248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3291 22 325 bZIP Transcription Factor Family AT3G56850 54.341 1.64e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa4g3291 bZIP_1 2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3291 K14432 - gmx:100101875 428.713