Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3269 ATGGGAGCTACCCCTGTTCTAAAAGCACAAAACCTTTCTGGTACTCTTCCACCTGATCTTGTGAGGTTGCCTTTTCTTCAAGAAATTAACCTAACCCTCAACTATCTTAATGGTACAATTCCCAAACAATGGGCTACATTAAGTCTTGTAAACATTTCCTTCTATGGAAATCGTCCATCTGGTCCAATTCCAAAGGAGTTTGGAGACATCGCCACTCTCAAAAGCTTGGTATTGGAGTTCAACCAGCTATCAGGAAATCTTCCTCCAGAACTTGGGAGTCTTAACCAGATTGAAAGACTGCTTCTTTCCTCCAACAATTTCACTGGAGTGTTACCTGCAACATTTGCTAAGTTCACTGCATTGAAGCAATTTCGAATTGGCGACAGTCAATTCTCTGGAGCAATACCCAACTTTATACAGAGTTGGAAAAATCTTGAGATGCTCGTGATCCGAGGGAGTGGTTTGAGTGGGCCAATTCCTTCTGGAATTTCACTTTTGAAAAATCTCACTGACTTGACTATTACTGACTTGAATGGATCTGATTCACCTTTTCCACAACTTGAAAATATGTCAAAGCTGTCAAAATTAGTACTGAGAAGTTGCAATATCATTGGAGCAGTGCCTGAGTATCTTGGAAAGTTAACTAATCTGAAAGCGATAGACCTCAGCAACAACAAATTAAGTGGACATATCCCCATGAGCATCGGGGGTCTAGAGAATATATACTTGCTATTTTTATCTGGGAATCAGCTGTTTGGATCGCTGCCTGACTGGATAGTTAAACCAGACTTTGTCAGACTTGTCAACAAGGAAGTGTGTAAGAGTCCTAGCATTGTGTTTTTTCACTTTTCTTTTAATTTCATGGTTTACATGTTCTGTATTTTTATGAAACGACATGGGCCTCAGTCAATTTCCTTATGCCACAGAAACTTGTTTGCGTCTTCTTTGACGGGAAACAGCTTAGGAAATGTTTCATGTTTGGAAAACTATCAATGTCCTAAAATTGATAACCCTTTTCTTCTTTTCCAAGCTTGGTACTCTCTCATAAACTGTGGTGGAAAGAGTGTAACTTTGGATGGAAATAAGACATATGATGATGATTCAACTGAGATGGAATCAGCAAGGTATCGTCAAATTGGAACAAACTGGGCACTTATAACTGCTGGTCACTTTTTTGATAGTGGACGCTCTGACTACTACATATGGTCTAATGCAACAAAGCTTGACGTTGACAATGATACTGAACTGTACATGGATGCACGTGTTTCTCCAAATTCTCTTACTTATTATGTATTCTGCATTGGAAATGGAAACTACACTGTGAAAGAGGTGGGTGGTGTTGGCAAGGCAGTTATTAAAACTTTTACTGCTGGTGTGACTAGAAATGCATTGGAGATTCGCTTATTTTGGGCTGGGAAAGGAACAACTACTATCCCACTTGGATCAGTATATGATTTTACACCCCCGTCGGAAAATAATAGAAGCATACCTGTAGGAGCTGTGGTTGCTATTGTGTTTGCAGGAGCAATTGTTATCATCTTTGTAATCGGCATAATGTGGTGGAAAGGCTGTTTAACACAGAAATGTTTAGGGGCAAGAGAGCAAAAGGGTCTTGCTTCACAAACTGGCTTATTCAGCTTACAGAAAATCAAAGCAGCAACAAACAACTTTGATGAATCTTTTAAGATTGGAGAAGGAGGATTTGGTCCTGTTTACAAGGGTGTTCTACAAGATGGCACAATCGTAGCGATTAAGCAGCTATCTTCTAAATCAACTCAAGGATTCCGTGAATTTATTAACGAGATAGGCATGATTTCTACTTTACAACACCCTAATCTTGTCAAGCTTTATGGCTTCTGTATGGAAGATGATCAGTTGTTGTTGATATATGAATACATGGAAAACAATAGCCTTGCTCATGCTTTATTTGCCAAGAAAGAAGACCTAGAAAATCGTCAATTGAGATTGGAATGGAAAACTAGGAAGAGAATTTGTATTGGTATAGCTAAAGATAAAGACCTCAACCCCAAGATATCTGATTTTGGTTTGGCAAAGCTCAATGAAGACGACAAAACCCACATGAACACCAGAATAGCTGGCACTTATGGATACATGGCTCCTGAGTATGCTATGCATGGTTATTTGACGGATAAAGCAGATGTTTATAGTTTTGGAATCGTTGTGTTGGAAATTGTTAGTCATCCCCAGGAAGAATGCTTCTCTCTTCTTGATTGGGTGCACCTCTTGAAGGAAAAAGATAATCTATTGGAGTTCGTTGATAGGAGATTGGGCGAAGACTTCAAGAAAGAGGAGATAACGACGATGATCAATGTGGCTCTTTTATGCACTAGTTATTCTCCGTCGCTCAGGCCTTCCATGTCTTCGGTAGTAAGCATGCTTGAAGGAAGAACAGATGCTGAAGAAGTGGTGGCAGAATCAAGTGAGGTATTGGATGATAAGAAATATAAGGTGATGCAACAATACTACAAACAAAGAGGAGGAGAAAGTAGCACAACTGAAGCTCAAAGCATCGCAACAGATGAATCTAATGCCTTTATATATGATACAGATTCTTCATGCTGGGAACCAAGAAATCAGCAAAACTATACAGCTTGCATATTTTTATTTTGA 2631 0.393 MGATPVLKAQNLSGTLPPDLVRLPFLQEINLTLNYLNGTIPKQWATLSLVNISFYGNRPSGPIPKEFGDIATLKSLVLEFNQLSGNLPPELGSLNQIERLLLSSNNFTGVLPATFAKFTALKQFRIGDSQFSGAIPNFIQSWKNLEMLVIRGSGLSGPIPSGISLLKNLTDLTITDLNGSDSPFPQLENMSKLSKLVLRSCNIIGAVPEYLGKLTNLKAIDLSNNKLSGHIPMSIGGLENIYLLFLSGNQLFGSLPDWIVKPDFVRLVNKEVCKSPSIVFFHFSFNFMVYMFCIFMKRHGPQSISLCHRNLFASSLTGNSLGNVSCLENYQCPKIDNPFLLFQAWYSLINCGGKSVTLDGNKTYDDDSTEMESARYRQIGTNWALITAGHFFDSGRSDYYIWSNATKLDVDNDTELYMDARVSPNSLTYYVFCIGNGNYTVKEVGGVGKAVIKTFTAGVTRNALEIRLFWAGKGTTTIPLGSVYDFTPPSENNRSIPVGAVVAIVFAGAIVIIFVIGIMWWKGCLTQKCLGAREQKGLASQTGLFSLQKIKAATNNFDESFKIGEGGFGPVYKGVLQDGTIVAIKQLSSKSTQGFREFINEIGMISTLQHPNLVKLYGFCMEDDQLLLIYEYMENNSLAHALFAKKEDLENRQLRLEWKTRKRICIGIAKDKDLNPKISDFGLAKLNEDDKTHMNTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVVLEIVSHPQEECFSLLDWVHLLKEKDNLLEFVDRRLGEDFKKEEITTMINVALLCTSYSPSLRPSMSSVVSMLEGRTDAEEVVAESSEVLDDKKYKVMQQYYKQRGGESSTTEAQSIATDESNAFIYDTDSSCWEPRNQQNYTACIFLF* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3269 876 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 205 258 - -
Psa4g3269 876 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 671 822 - -
Psa4g3269 876 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 204 - -
Psa4g3269 876 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 514 670 - -
Psa4g3269 876 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 343 442 - -
Psa4g3269 876 Pfam Malectin domain 349 442 IPR021720 -
Psa4g3269 876 Gene3D Phosphorylase Kinase; domain 1 526 632 - -
Psa4g3269 876 Pfam Protein tyrosine and serine/threonine kinase 675 800 IPR001245 GO:0004672|GO:0006468
Psa4g3269 876 Gene3D - 346 442 - -
Psa4g3269 876 ProSiteProfiles Protein kinase domain profile. 557 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3269 876 SUPERFAMILY Protein kinase-like (PK-like) 543 810 IPR011009 -
Psa4g3269 876 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 205 258 - -
Psa4g3269 876 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 671 822 - -
Psa4g3269 876 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 4 204 - -
Psa4g3269 876 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 343 442 - -
Psa4g3269 876 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 514 670 - -
Psa4g3269 876 Gene3D Ribonuclease Inhibitor 112 331 IPR032675 -
Psa4g3269 876 Pfam Leucine rich repeat 192 251 IPR001611 GO:0005515
Psa4g3269 876 SUPERFAMILY L domain-like 10 269 - -
Psa4g3269 876 Gene3D Ribonuclease Inhibitor 5 111 IPR032675 -
Psa4g3269 876 Gene3D Transferase(Phosphotransferase) domain 1 633 828 - -
Psa4g3269 876 Pfam Protein kinase domain 560 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3269 Psa-Chr4 277346958 277354266 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3269 7 851 Receptor kinase-like Gene Family AT1G53420 45.981 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa4g3269 PK_Tyr_Ser-Thr 4.8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3269 - - ccaj:109799273 1026.16