Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3264 ATGTTTTTTGATGACCAGACTTTTAAAAGTCTTGGAAGGCGCATATTTGATGTTTCAATTCAAGGTTTTAAATATTGGAAAGATTTTAACATTAAGGAAGAAGCTGGTGGAGTTGGAAAGGGAATCACTAAGGAATTCGAAGTTGAAGTCAACGACAACACGCTGGAAATTCACTTATATTGGGCAGGGAAAGGAACCACGGCCATTCCTGACAGAGGTGTATATGGACCTCTTATATCAGCTATCACAGTAACACCGAACTTCAAAAATCATTCAGAAGGGTTGTCTGCTGGAGTTATTATTGGAATTGTGGCTGCATCATGTGTGGTTGTCATACTCATAGTGGTTGCCATTTGGAAGATGGGTTTCCTTGGTGGAAAAGATATAAGAAACAAAGGTTATTTCTGCTTGAGACAAATTAAAGAAGCTACTAATGACTTTGACCCTGCAAATAAGATTGGTGAAGGTGGATTTGGGCCAGTATTCAAGGGTGTGCTGTCAGACGGTGATGTCATTGCTGTTAAACAGCTCTCCTCCAAATCAAAGCAAGGGAACCGCGAATTTGTTAACGAAATTGGAATGATATCTGCTTTGCAGCATCCAAATCTTGTTAAGCCCTCTACGGCTGTTGCATTGAAGGAAAGCAGTCATCAGANTTTTAAATATTTGAAAGATTTTAACATTAAGGAAGAAGCTGGTGGAGTTGGAAAGGGAATCACTAAGGAATTCGAAGTTGAAGTCAACGGACAACACGCTGGAAATTCACTTATATTGGGCAGGGAAAGGAACCACGGCCTTCCTGACAGAGGTGTATATGGACCTCTTATATCAGCTATCACAGTAACACCGAACTTCAAAAATCATTCAGAAAGGTTGTCTGCTGGAGGTATTATTGGAATTGTGGCTGCATCATGTGTGGTTGTCATACTCATAGTGGTTGCCATTTGGAAGATGGGTTTCCTTGGTGGAAAAGATATAAGAAACAAAGACCTTCTTGATCTTAAAACAGGTTATTTTGCTTGA 1023 0.3988 MFFDDQTFKSLGRRIFDVSIQGFKYWKDFNIKEEAGGVGKGITKEFEVEVNDNTLEIHLYWAGKGTTAIPDRGVYGPLISAITVTPNFKNHSEGLSAGVIIGIVAASCVVVILIVVAIWKMGFLGGKDIRNKGYFCLRQIKEATNDFDPANKIGEGGFGPVFKGVLSDGDVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKPSTAVALKESSHQXFKYLKDFNIKEEAGGVGKGITKEFEVEVNGQHAGNSLILGRERNHGLPDRGVYGPLISAITVTPNFKNHSERLSAGGIIGIVAASCVVVILIVVAIWKMGFLGGKDIRNKDLLDLKTGYFA* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3264 340 PANTHER KINASE-RELATED 4 205 - -
Psa4g3264 340 PANTHER KINASE-RELATED 216 301 - -
Psa4g3264 340 Gene3D - 1 88 - -
Psa4g3264 340 Pfam Protein kinase domain 150 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3264 340 Pfam Malectin domain 5 82 IPR021720 -
Psa4g3264 340 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 216 301 - -
Psa4g3264 340 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 205 - -
Psa4g3264 340 ProSiteProfiles Protein kinase domain profile. 147 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3264 340 Gene3D Phosphorylase Kinase; domain 1 127 215 - -
Psa4g3264 340 SUPERFAMILY Protein kinase-like (PK-like) 134 214 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3264 Psa-Chr4 277048196 277050257 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3264 224 340 Receptor kinase-like Gene Family AT1G53440 48.780 6.36e-22 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa4g3264 Pkinase 5.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3264 - - gmx:100817368 336.65