Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3263 ATGAAGATATGTCTTGGTATAGCTAAGGGTTTAGCTTATCTTCATGAAGAATCAACACTGAAAATAGTACACAGAGACATCAAGGCAACTAATGTATTGCTTGACAAGGATCTGAATGCCAAGATCTCTGACTTCGGTTTAGCCAAGCTTGATGACGAAGGGAACACCCATATCAGTACCCGGGTCGCTGGAACAATTGGATACATGGCTCCAGAATACGCTATGCGGGGTTACTTGACTGATAAAGCAGATGTATATAGCTTTGGAGTTGTAGCACTAGAGATTGTTAGCGGAAAAAGCAACACAAATTTCAACCCAATGGAAAAGTTTGTATATCTTATGGATTGGGCCTATGATCTCCAAGAGCAAGGACGCCTTATGGAGCTGGTGGATCCAAATCTTGGTTCAAGCTACTCCACATTGGAGGCCATGAGAATGCTGAGGTTGGCATTGTTATGCACAAACACATCTCCCACTCATAGACCATCCATGTCATTGGTAGTAAGCATGCTTGAAGGAAAAACTCCAATCCAAGCGCCATTAATCAACCGCGGTGAGAGTGGCCACCATGCAAGACTCAAAGCCTCTGACTTGCTGTCAGAAGATAGTCAACCTCTTGATTCTTCTACGTTTTCACACGAAAGCATTGATCAAAGACATGGATCATCAAATGGGCCATAG 681 0.4332 MKICLGIAKGLAYLHEESTLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDDEGNTHISTRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNFNPMEKFVYLMDWAYDLQEQGRLMELVDPNLGSSYSTLEAMRMLRLALLCTNTSPTHRPSMSLVVSMLEGKTPIQAPLINRGESGHHARLKASDLLSEDSQPLDSSTFSHESIDQRHGSSNGP* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3263 226 MobiDBLite consensus disorder prediction 201 226 - -
Psa4g3263 226 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 2 199 - -
Psa4g3263 226 SUPERFAMILY Protein kinase-like (PK-like) 2 176 IPR011009 -
Psa4g3263 226 SMART serkin_6 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3263 226 ProSiteProfiles Protein kinase domain profile. 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3263 226 MobiDBLite consensus disorder prediction 198 226 - -
Psa4g3263 226 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 199 - -
Psa4g3263 226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
Psa4g3263 226 Pfam Protein tyrosine and serine/threonine kinase 2 171 IPR001245 GO:0004672|GO:0006468
Psa4g3263 226 Gene3D Transferase(Phosphotransferase) domain 1 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3263 Psa-Chr4 277046098 277047306 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3263 2 226 Receptor kinase-like Gene Family AT1G53430 72.368 1.44e-105 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa4g3263 PK_Tyr_Ser-Thr 1.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3263 - - gmx:100815226 353.214