Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3157 ATGTCGTTGAATGGAACAACTATCTCACTTGTTGGAGCAAAACTTCAAGCAGTAACACAACCAGGAGTTGAAGGTTTGGATATTTGGAATGAAGGTGACTTGAAGGTCGATGGAAAATGCAAGTGGTTTGATTTGGATATCTCCCACCATATTCTGTGTTCCGGCTGCAGCAGACTTGCGTTTTGGTTACAGCACAGGCATCTGCTTTCGGCTTCTCCATTGTCTAGCGTCATCACAAAGTGTTGTCACATTGATACTTTCAGGTTATGGCATGGTTTGGGAGTTCATGAGCCCAACATCGCTGTGGACCGTGGAATGAAGCTTTGTGCAGGCCGAAATGGAAGACAAAATGCCAATTATGCCTGCCTGCAATTTAGCCAGCGCTCCAGTCTTACATTCGTGTTGGCTATAATGATGGGTATAGAAAGAGTAAGCTTGCTAAGGCATGAAGGTCTGGCCAAGGAACTGCATGTGCAGGTTTCTTTTCTATCCATTCAGGCTCAGATTATAAAAAAGTATCCTGCAAACCTATCTGTCACAACATATTCGTACTGCTTCGGAGCTTTACTGATGGTAATTACATCATACTTCGTAACCGACGAGTTAACTGATTGGAGTTTGAATCAGTCTGAAACATTTGCCATTTTATATGCTGAAATTATTGCATCTGCACTTAATTATGGAATCATCACATGGAGCAAATTTGGATTGTCTTCACTACCAAATCCGGAAACCAATTATAAATCGAGCATGGCCGCATTTACGAAGGCCAGAGTTGCTGCTGCTGTCGGCGTTTCCGTCAATGCCGGTGGGTGGTGTTGTTGCCTTGCAGCCCCTGATGCTATTCCGTTTACCATTGCTACCAGATATAGTGATGTTCGAAGGAAGTTTGGATCTCAGAATGGTGGTCTTGAAACACAGACGGCAAGTGCTATCACGCGACTTGAAGTTTTGGAAATGAAGAGAATTGAGAAAGGGACCACAAGTGGAATAAGGACAAAACTCCCCAGACATCCTCTGTACAAAAAAACCTCTCCACAACACAGCAGACCTCCACTACACAGCAGGAAACACAACAGAGGAAAGAGATGGGTCATATATAAAAGAGGGATTACTATTCACAACAACCCTAATTTTTTTGGGGAGAGGAGCCGTTACTGTTCACTAAGAGAAAAGGGAGTCGACGACAAGGAGAAAAGAAAACCATAG 1209 0.4351 MSLNGTTISLVGAKLQAVTQPGVEGLDIWNEGDLKVDGKCKWFDLDISHHILCSGCSRLAFWLQHRHLLSASPLSSVITKCCHIDTFRLWHGLGVHEPNIAVDRGMKLCAGRNGRQNANYACLQFSQRSSLTFVLAIMMGIERVSLLRHEGLAKELHVQVSFLSIQAQIIKKYPANLSVTTYSYCFGALLMVITSYFVTDELTDWSLNQSETFAILYAEIIASALNYGIITWSKFGLSSLPNPETNYKSSMAAFTKARVAAAVGVSVNAGGWCCCLAAPDAIPFTIATRYSDVRRKFGSQNGGLETQTASAITRLEVLEMKRIEKGTTSGIRTKLPRHPLYKKTSPQHSRPPLHSRKHNRGKRWVIYKRGITIHNNPNFFGERSRYCSLREKGVDDKEKRKP* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3157 402 PANTHER WAT1-RELATED PROTEIN 118 155 - -
Psa4g3157 402 PANTHER WAT1-RELATED PROTEIN 161 235 - -
Psa4g3157 402 PANTHER WAT1-RELATED PROTEIN 118 155 IPR030184 GO:0016021|GO:0022857
Psa4g3157 402 PANTHER WAT1-RELATED PROTEIN 161 235 IPR030184 GO:0016021|GO:0022857
Psa4g3157 402 MobiDBLite consensus disorder prediction 339 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3157 Psa-Chr4 260793236 260795254 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3157 161 243 Nodulin-like Gene Family AT5G45370 51.724 2.45e-21 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3157 - - lja:Lj0g3v0135339.1 118.627