Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3155 GCATTTGGGTGAATCCGAGTTACAGAAATTAACTGTAGATGGACTAAAAAAGGAGATACTTTCACTTATTGAACATGAGGTTGGATCTGATAAAGTGTCTATAGTGCATTGCTGGAAATGTTTCTTTGCCCGTTATTTCCATAATTGGTGCAAGAACAATGCATTATATGGCTTGCTTGTTGATTCCTCTACTGTTGCTGTTGGTTTAATCAAGAAAAAATCAGTTTCACTTTTTCGGTCTCTGGAAGATATTGAGCGGATTGTAGAGGGATCTTCAGAGGAAGTTAGTGAGCTCACAGGCATTGTGGATTTGTTTGATGATGATATTGAGTGTGAAATTCTGATCGAATTGCTCAAGTGTGTCACGAGTTTCAGCCAACAGTTGGGCAAAACTGCCTCTTCTATATTTTATGAATCACTTTTAATTGCACCGATGATCTCTTCTGAAGATATTGTTCACTGTATAGTGAAGGTTCTTGAAACTGGTTATTGTATATCAGGTGCAGTGCTCCGAAGATCTACATCTGGGGATCATACAATATTCCTGCAAAAGGAACTAGCAGATCATAGAACTGTTATAGAGGACATATGTTCTCTTCGTTCTGACGTGGAAAGGCTAGCATTCTCTATCATATGGGAAATGACACCTGAAGCAGATATTATTTCCACCAGATACGCAAAAAGTGTCATAAAATCTGCAGCAACATTGTCTTATGTTGAAGCACAAGCGAGGATGGATGATAGTCGATTGATGGATCCAGTAACTACTGACTTGAGAAATATGAATAGTTTAGCAAGTGATGCAGTACGGTTCAAGACGGCTCATGTTCCGTATGTTGTTGCCGTTTGTGATGCATTGCAGCTTGTGTCCTTTTCATCGCCAATGTGTCGCCGTTGTTGCATGATCAGATTGCGAGTCATGACAGTTTTGTTGGGCAATCATGTGATTCGTGCAATGTCGTTGAATGGAGCAACTATCTCACTTGTTGGAGCAAAACTTCAAGCAGTAACACAACCAGGAGTTGAAGGTTTGGATATTTGGAATGAAGGCGACTTGAAGGTCGATGGAAAATGCAAGTGGTTTGGTTTGGATATCGCCCACCATATTCTGCGTTCCGGCTGCAGCAGACTTGCGTTTTGGTTACAGCACAGGCATCTGCTTTGGGCTTCTCCATTGTCTAGCGTCATCACAAAGTGTTGTCACATTGATACTTTCAGGTTATGGCATGGTTTGGGAGTTCATGAGCTCAACATCGTTGTGGACCGTGGAATGAAGCTTTGTGCAGGCCGAAACGTAACACAACCAGGAGTTGAAGGTTTGGATATTTGGAATGAAGGTGACTTGAAGGTCGATGGAAAATGCAAGTGGTTTGATTTGGATATCTCCCACCATATTCTGTGTTCCGGCTGCAGCAGACTTGCGTTTTGGTTACAGCACAGGCATCTGCTTTCGGCTTCTCCATTGTCTAGCGTCATCACAAAGTGTTGTCACATTGATACTTTCAGGTTATGGCATGGTTTGGGAGTTCATGAGCCCAACATCGCTGTGGACCGTGGAATGAAGCTTTGTGCAGGCCGAAATGAAAGAGTAAGCTTGCTGAGGTATGAAGGTCTGGCCAAGGGTGAAGGAATTTTCGTCGGTGTTTTGGGGGCCTTAATGATGGTTTTGCACCATGGACCAACACTGGTAGGATCTTCGGGATTGGACCTTATATCACACGGTGAAATAAGTTCCAGAGGTCAACCAAAGCCTTCTGGATGGTTAGTTAGTGGTTTAATGGATCTTGGACTTGACCATTTTCATCTTGGAGTTTTGTGCTTCATAGGGAACTGCATGTGCATGGTTTCTTTTCTATCCATTCAGGCTCCATTATTAAAAAAGTATCCTGCAAACCTATCTGTCACAACATATTCGTACTGCTTCGGAGCTTTACTGATGGTAATTACATCATACTTCGTAACCGACGAGTTAACTGATTGGAGTTTGAATCAATCTGAAACATTTGCCATTTTATATGCTGAAATTATTGCATCTGCACTTAATTATGGAATCATCACATGGAGCAAATTTGGATTGTCTTCACTACCAAATCCAGAAACCAACTATAAATCGAGCATGGCCGCATTTACGAAGGCCAGAGTTGCTGCTGCTGTCGGCGTTTCCGTCAATGCCGGTGGGTGGTGTTGTTGCCTTGCAGCCCCTGATGCTATTCCGTTTACCATTGCTACTAGATATAGTGATGTTCAAAGGAAGTTTGGATCTCAGAATGGTGGTCTTGAAACACAGACGGCAAGTGCTATCACGCGACTGTCATTGCAGCAAAACAACCATAGCCCTGCAAAGATCAAACCAAATCCACGTCAAAGCCACTGCGACACAAACACACAAAAATCAGTCCAATTCCAAAAAAAGAAGAGAAAACACATATTCAAGTAA 2437 0.4235 HLGESELQKLTVDGLKKEILSLIEHEVGSDKVSIVHCWKCFFARYFHNWCKNNALYGLLVDSSTVAVGLIKKKSVSLFRSLEDIERIVEGSSEEVSELTGIVDLFDDDIECEILIELLKCVTSFSQQLGKTASSIFYESLLIAPMISSEDIVHCIVKVLETGYCISGAVLRRSTSGDHTIFLQKELADHRTVIEDICSLRSDVERLAFSIIWEMTPEADIISTRYAKSVIKSAATLSYVEAQARMDDSRLMDPVTTDLRNMNSLASDAVRFKTAHVPYVVAVCDALQLVSFSSPMCRRCCMIRLRVMTVLLGNHVIRAMSLNGATISLVGAKLQAVTQPGVEGLDIWNEGDLKVDGKCKWFGLDIAHHILRSGCSRLAFWLQHRHLLWASPLSSVITKCCHIDTFRLWHGLGVHELNIVVDRGMKLCAGRNVTQPGVEGLDIWNEGDLKVDGKCKWFDLDISHHILCSGCSRLAFWLQHRHLLSASPLSSVITKCCHIDTFRLWHGLGVHEPNIAVDRGMKLCAGRNERVSLLRYEGLAKGEGIFVGVLGALMMVLHHGPTLVGSSGLDLISHGEISSRGQPKPSGWLVSGLMDLGLDHFHLGVLCFIGNCMCMVSFLSIQAPLLKKYPANLSVTTYSYCFGALLMVITSYFVTDELTDWSLNQSETFAILYAEIIASALNYGIITWSKFGLSSLPNPETNYKSSMAAFTKARVAAAVGVSVNAGGWCCCLAAPDAIPFTIATRYSDVQRKFGSQNGGLETQTASAITRLSLQQNNHSPAKIKPNPRQSHCDTNTQKSVQFQKKKRKHIFK* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3155 811 MobiDBLite consensus disorder prediction 775 798 - -
Psa4g3155 811 Pfam Family of unknown function (DUF5311) 102 191 IPR035192 -
Psa4g3155 811 Pfam RNB domain 191 267 IPR001900 GO:0003723|GO:0004540
Psa4g3155 811 PANTHER WAT1-RELATED PROTEIN 527 690 - -
Psa4g3155 811 PANTHER WAT1-RELATED PROTEIN 527 690 IPR030184 GO:0016021|GO:0022857
Psa4g3155 811 MobiDBLite consensus disorder prediction 775 811 - -
Psa4g3155 811 Pfam Nucleoporin Nup120/160 6 87 - -
Psa4g3155 811 SUPERFAMILY Nucleic acid-binding proteins 191 267 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3155 Psa-Chr4 260768533 260773062 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3155 511 698 Nodulin-like Gene Family AT5G45370 47.917 3.65e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3155 - - gsj:114381915 323.553