Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3134 ATGGCTGAAGAACAATTTCAAGTTAGTGGAAATTGGTGGGAGACACCGGCTAGAAACATGAGATTTGAAAGTGTTGAACAACAACAGCAGCAACAACAACAACAATCTTCCTCGTTTGGTGGTTGGCAGCAACAACATCATGATACCATGTCCGCTTCCGGTAGTTCTTCGGTGATTTTTCATGATACTACTCAAAAACTTCAACCTTCAGATTCTTCTACTTCAAATAATGACAACAATAACTTGCATATGATGAATTTGGGACTTTCGTCTCAAACCATTGATTGGAATCAAGCATCTTTACTAAGAAGTGACAAGGCTTCAGAAGGAAGTTTCAGGTCTATGCTACAAGAGAATTTGAACTCATCAAGCACGAATTTCGATCAAGAAACTGGTGGAGTTGGATTGAGTAATTGGAGGCAAGAAAAGTTGTTTTCGACTGAATCTTCGAACAACGAATTCAAGCAAGTGAATAGAGGTTTCTCTTTGGATCAAACACAGTTTAGTCCTCAATATAGCTCAGGAGATAGTAACATGATAAGCCAAATGGACTCTTCAGCTTTATATGGTAACCCTTCAATGTTACAAGGACTTTTAGGAACTGAAACCAATCAAATTCAACCTCAACATGGTAATAATTCATTCGAGAATCATCGTTCGATGAATTTTCCTTACTCGTCAACAAGCTATGGTTTGAGTTCAAATGATTTAGTTCCTTCTTGGTCTAAACAACAACATCAACAACCAAATAACCAGTTGCATTTCACCAACAATGCTCCATTTTGGAATGCTTCAGAGTCTACTCTTAAAGATTCATCATCAAGTTTCTTGCCTCCATTTACCACACCGAATTCTGGTGCACAAACGAAGAATATATCTGAAGGTAGGGACCCAAGTGGTGTGGTGAAGAAAAGTGGGAGTGAGCCTGCACCAAAAAGGTCCAGAAATGAAACCCCATCACCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAAATGGGGGACAGAATCACTGCACTTCAACAATTGGTTTCACCTTTCGGAAAGACTGATACAGCCTCAGTGCTCTCCGAAGCAATTGAATATATCAAGTTTCTTCATGAACAAGTGACTATTTTAAGCACACCGTATATGAAAAATGGTCCTCCAATCCAACATCAACAGGGTTCTGGTAAATCTAAGGAAGTAGAGGGTCCAAGGCAAGATCTTAGAAGCAGAGGGTTATGCTTAGTACCAGTTTCTAGTACATTTCCAATGACTCATGAACCCACAGTTGAATATTGGACACCAACATTTGGAGGAACTTTCAGATAA 1311 0.3928 MAEEQFQVSGNWWETPARNMRFESVEQQQQQQQQQSSSFGGWQQQHHDTMSASGSSSVIFHDTTQKLQPSDSSTSNNDNNNLHMMNLGLSSQTIDWNQASLLRSDKASEGSFRSMLQENLNSSSTNFDQETGGVGLSNWRQEKLFSTESSNNEFKQVNRGFSLDQTQFSPQYSSGDSNMISQMDSSALYGNPSMLQGLLGTETNQIQPQHGNNSFENHRSMNFPYSSTSYGLSSNDLVPSWSKQQHQQPNNQLHFTNNAPFWNASESTLKDSSSSFLPPFTTPNSGAQTKNISEGRDPSGVVKKSGSEPAPKRSRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTILSTPYMKNGPPIQHQQGSGKSKEVEGPRQDLRSRGLCLVPVSSTFPMTHEPTVEYWTPTFGGTFR* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3134 436 MobiDBLite consensus disorder prediction 281 324 - -
Psa4g3134 436 Gene3D - 326 379 IPR036638 GO:0046983
Psa4g3134 436 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 326 383 IPR036638 GO:0046983
Psa4g3134 436 SMART finulus 327 371 IPR011598 GO:0046983
Psa4g3134 436 CDD bHLH_AtbHLH_like 322 373 IPR045239 -
Psa4g3134 436 MobiDBLite consensus disorder prediction 381 401 - -
Psa4g3134 436 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 316 365 IPR011598 GO:0046983
Psa4g3134 436 MobiDBLite consensus disorder prediction 281 295 - -
Psa4g3134 436 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 10 424 - -
Psa4g3134 436 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 10 424 - -
Psa4g3134 436 MobiDBLite consensus disorder prediction 23 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3134 Psa-Chr4 256862054 256866174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3134 103 436 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 43.523 3.20e-69 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3134 - - gmx:100778697 545.043